Merge branch 'master' into Liu2024_addmissingERS

CHANGELOG.md

@@ -25,6 +25,7 @@ and this project follows to [Calendar Versioning](https://calver.org/).
 ### Changed
 
 - Fix archive sample accession codes for Liu 2024 10.1126/sciadv.adn8490 (@alexhbnr)
+- Update the data_publication_doi of Lebrasseur 2024 10.1093/ve/vead087 (@alexhbnr)
 
 ### Removed
 
@@ -40,7 +41,7 @@ and this project follows to [Calendar Versioning](https://calver.org/).
 
 - Sun 2024 10.1038/s41467-024-47358-6 (added by @aidaanva)
 - Urban 2024 10.1016/j.cub.2024.04.006 (added by @aidaanva)
-- Lebrasseur 2024 10.1093/ve/vead087(added by @YuejiaoHuang)
+- Lebrasseur 2024 10.1093/ve/vead087 (added by @YuejiaoHuang)
 
 #### Ancient Metagenome: Environmental
 

ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv

@@ -3100,11 +3100,11 @@ Sun2024	2024	10.1038/s41467-024-47358-6	XBQM20	GSA	PRJCA020853	SAMC3135942	XBQM2
 Sun2024	2024	10.1038/s41467-024-47358-6	XBQM46	GSA	PRJCA020853	SAMC3135943	XBQM46	double	PfuTurbo Cx Hotstart DNA	full-udg	HiSeq X Ten	SINGLE	Targeted-Capture	16540	CRR927092	fastq_mapped	ftp://download.big.ac.cn/gsa2/CRA013222/CRR927092/CRR927092.fastq.gz	8abe20d7ad71529e7606cf357155ccbc	3868947
 Sun2024	2024	10.1038/s41467-024-47358-6	XBQM125	GSA	PRJCA020853	SAMC3135944	XBQM125	double	PfuTurbo Cx Hotstart DNA	none	HiSeq X Ten	SINGLE	Targeted-Capture	343	CRR927093	fastq_mapped	ftp://download.big.ac.cn/gsa2/CRA013222/CRR927093/CRR927093.fastq.gz	45efa889dc53958b1e64eb13b3a4fbb2	90445
 Sun2024	2024	10.1038/s41467-024-47358-6	11KBM13	GSA	PRJCA020853	SAMC3135945	11KBM13	double	PfuTurbo Cx Hotstart DNA	half-udg	HiSeq X Ten	SINGLE	Targeted-Capture	1690	CRR927094	fastq_mapped	ftp://download.big.ac.cn/gsa2/CRA013222/CRR927094/CRR927094.fastq.gz	c7360f598593b3e4980300f34bca35e4	254052
-Lebrasseur2024	2024	10.1038/s41586-021-04018-9	UR17x29	ENA	PRJEB44430	ERS7256200	L5	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	145317698	ERR6466112	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz	e4e00eb66e236b20020f6d12323ff24d	5064443689
-Lebrasseur2024	2024	10.1038/s41586-021-04018-9	UR17x29	ENA	PRJEB44430	ERS7256200	L3	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	164415447	ERR6466110	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz	3387cbb54cd5593384586c3f70787405	6026604046
-Lebrasseur2024	2024	10.1038/s41586-021-04018-9	UR17x29	ENA	PRJEB44430	ERS7256200	L1	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	9413628	ERR6466108	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz	082fa661d3351c0fac22e2e922dc3795	342573885
-Lebrasseur2024	2024	10.1038/s41586-021-04018-9	UR17x29	ENA	PRJEB44430	ERS7256200	L2	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	123717709	ERR6466109	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz	267fe0d4b684a1cf765ae560abdfbbc3	4352735230
-Lebrasseur2024	2024	10.1038/s41586-021-04018-9	UR17x29	ENA	PRJEB44430	ERS7256200	L4	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	141415855	ERR6466111	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz	7bed95eb12f3d17c93fd6d47c5edfd04	4974034411
+Lebrasseur2024	2024	10.1093/ve/vead087	UR17x29	ENA	PRJEB44430	ERS7256200	L5	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	145317698	ERR6466112	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz	e4e00eb66e236b20020f6d12323ff24d	5064443689
+Lebrasseur2024	2024	10.1093/ve/vead087	UR17x29	ENA	PRJEB44430	ERS7256200	L3	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	164415447	ERR6466110	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz	3387cbb54cd5593384586c3f70787405	6026604046
+Lebrasseur2024	2024	10.1093/ve/vead087	UR17x29	ENA	PRJEB44430	ERS7256200	L1	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	9413628	ERR6466108	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz	082fa661d3351c0fac22e2e922dc3795	342573885
+Lebrasseur2024	2024	10.1093/ve/vead087	UR17x29	ENA	PRJEB44430	ERS7256200	L2	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	123717709	ERR6466109	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz	267fe0d4b684a1cf765ae560abdfbbc3	4352735230
+Lebrasseur2024	2024	10.1093/ve/vead087	UR17x29	ENA	PRJEB44430	ERS7256200	L4	double	AccuPrime Pfx DNA	half-udg	Illumina HiSeq 4000	SINGLE	WGS	141415855	ERR6466111	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz	7bed95eb12f3d17c93fd6d47c5edfd04	4974034411
 White2021	2021	10.3390/biology10121324	B2_B3	ENA	PRJEB49091	ERS9769380	L022	double	AmpliTaq Gold DNA	none	Illumina HiSeq 4000	PAIRED	WGS	172363072	ERR13663673	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_2.fastq.gz	93fe32a1e7baafdbe2ab5fde69a6d998;47cf6d5fec371200015a493a0839c828	4381516936;4643855551
 White2021	2021	10.3390/biology10121324	B2_B5	ENA	PRJEB49091	ERS9769381	L023	double	AmpliTaq Gold DNA	none	Illumina HiSeq 4000	PAIRED	WGS	165002236	ERR13663674	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_2.fastq.gz	370f2ee1d8d3929d4999d1ef6ba795f5;0390ac309d270d11f8ef01d1a98fe74f	4143803128;4491981331
 White2021	2021	10.3390/biology10121324	B2_B6	ENA	PRJEB49091	ERS9769382	L024	double	AmpliTaq Gold DNA	none	Illumina HiSeq 4000	PAIRED	WGS	164114498	ERR13663676	fastq_all	ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_2.fastq.gz	abafcc2b76f2d56f01e5c6ed95f0f20c;e65f30975fa8ff540a9083b77b25646b	4147933772;4482524602