Merge pull request #1174 from SPAAM-community/Wright-2024

Wright2024
SPAAM-community · Jul 15, 2024 · 144fd2d · 144fd2d
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -11,6 +11,8 @@ and this project follows to [Calendar Versioning](https://calver.org/).
 
 #### Ancient Metagenome: Host Associated
 
+- Wright 2024 10.1016/j.jasrep.2024.104510 (added by @biancamariabonucci)
+
 #### Ancient Single Genome: Host Associated
 
 - Sun 2024 10.1038/s41467-024-47358-6 (added by @aidaanva)

diff --git a/ancientmetagenome-hostassociated/libraries/ancientmetagenome-hostassociated_libraries.tsv b/ancientmetagenome-hostassociated/libraries/ancientmetagenome-hostassociated_libraries.tsv
@@ -2556,3 +2556,7 @@ Jackson2024	2024	10.1093/molbev/msae017	KGH1-A	ENA	PRJEB64128	ERS15977752	KGH1-A
 Jackson2024	2024	10.1093/molbev/msae017	KGH1-A	ENA	PRJEB64128	ERS15977752	KGH1-A-EX3-UDG1-65-PCR1-Hi4	double	AccuPrime Pfx DNA	full-udg	NA	Illumina HiSeq 2500	SINGLE	WGS	18075792	ERR11660445	ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/045/ERR11660445/ERR11660445.fastq.gz	9e974e9078f2ec455545f41de0805fa3	1473539606
 Jackson2024	2024	10.1093/molbev/msae017	KGH1-A	ENA	PRJEB64128	ERS15977752	KGH1-A-EX3-UDG1-7-PCR1-Hi5	double	AccuPrime Pfx DNA	full-udg	NA	Illumina HiSeq 2500	SINGLE	WGS	52644806	ERR11660446	ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/046/ERR11660446/ERR11660446.fastq.gz	31fdd8566f68fbe51e47b3c5ea29a5e1	4217640964
 Jackson2024	2024	10.1093/molbev/msae017	KGH1-A	ENA	PRJEB64128	ERS15977752	KGH1-A-EX3-UDG2-8-PCR2-Hi5	double	AccuPrime Pfx DNA	full-udg	NA	Illumina HiSeq 2500	SINGLE	WGS	21524540	ERR11660450	ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/050/ERR11660450/ERR11660450.fastq.gz	f89c5d6ac5e6cb9519a38efad1a8835a	1766801606
+Wright2024	2024	10.1016/j.jasrep.2024.104510	ROM_5C	SRA	PRJNA704183	SRS8307107	ROM_5C	double	KAPA HiFi HotStart DNA	none	NA	NextSeq 500	PAIRED	WGS	18990285	SRR13769012	ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/012/SRR13769012/SRR13769012_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/012/SRR13769012/SRR13769012_2.fastq.gz	9757870d83e53bdcd719fa60f87e328e;0b369fbb86e1a902ab166b712620dd47	711584041;695346998
+Wright2024	2024	10.1016/j.jasrep.2024.104510	ROM_5D	SRA	PRJNA704183	SRS8307108	ROM_5D	double	KAPA HiFi HotStart DNA	none	NA	NextSeq 500	PAIRED	WGS	17373684	SRR13769011	ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/011/SRR13769011/SRR13769011_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/011/SRR13769011/SRR13769011_2.fastq.gz	9c3a01d9f356fc153a1e57265435b1b4;3ab8bffe5e74c31c8c1836b1a3930515	622824692;622800278
+Wright2024	2024	10.1016/j.jasrep.2024.104510	ROM_10D	SRA	PRJNA704183	SRS8307110	ROM_10D	double	KAPA HiFi HotStart DNA	none	NA	NextSeq 500	PAIRED	WGS	18815387	SRR13769009	ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/009/SRR13769009/SRR13769009_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/009/SRR13769009/SRR13769009_2.fastq.gz	4e29507f47e163c4a16f64d90fb524f6;ce88879fe292db732dc173eb9536947b	746940101;743714612
+Wright2024	2024	10.1016/j.jasrep.2024.104510	ROM_9C	SRA	PRJNA704183	SRS8307109	ROM_9C	double	KAPA HiFi HotStart DNA	none	NA	NextSeq 500	PAIRED	WGS	21305627	SRR13769010	ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/010/SRR13769010/SRR13769010_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR137/010/SRR13769010/SRR13769010_2.fastq.gz	a98a7030ce982a184d2fffda92522465;0d2e767d81008e599b4ad355d906e880	741768144;697486536
diff --git a/ancientmetagenome-hostassociated/samples/ancientmetagenome-hostassociated_samples.tsv b/ancientmetagenome-hostassociated/samples/ancientmetagenome-hostassociated_samples.tsv
@@ -1426,3 +1426,7 @@ Jackson2024	2024	10.1093/molbev/msae017	Killuragh	52.6	-8.33	Ireland	KGH2-F	Homo
 Jackson2024	2024	10.1093/molbev/msae017	Killuragh	52.6	-8.33	Ireland	KGH2-B	Homo sapiens	3800	10.1093/molbev/msae017	oral	tooth	ENA	PRJEB64128	ERS15977754
 Jackson2024	2024	10.1093/molbev/msae017	Killuragh	52.6	-8.33	Ireland	KGH1-E	Homo sapiens	3800	10.1093/molbev/msae017	oral	tooth	ENA	PRJEB64128	ERS15977753
 Jackson2024	2024	10.1093/molbev/msae017	Killuragh	52.6	-8.33	Ireland	KGH1-A	Homo sapiens	3800	10.1093/molbev/msae017	oral	tooth	ENA	PRJEB64128	ERS15977752
+Wright2024	2024	10.1016/j.jasrep.2024.104510	Histria	44.55	28.78	Romania	ROM_5C	Homo sapiens	1600	10.1016/j.jasrep.2024.104510	oral	dental calculus	SRA	PRJNA704183	SRS8307107
+Wright2024	2024	10.1016/j.jasrep.2024.104510	Histria	44.55	28.78	Romania	ROM_5D	Homo sapiens	1600	10.1016/j.jasrep.2024.104510	oral	dentine	SRA	PRJNA704183	SRS8307108
+Wright2024	2024	10.1016/j.jasrep.2024.104510	Histria	44.55	28.78	Romania	ROM_10D	Homo sapiens	1600	10.1016/j.jasrep.2024.104510	oral	dentine	SRA	PRJNA704183	SRS8307110
+Wright2024	2024	10.1016/j.jasrep.2024.104510	Histria	44.55	28.78	Romania	ROM_9C	Homo sapiens	1600	10.1016/j.jasrep.2024.104510	oral	dental calculus	SRA	PRJNA704183	SRS8307109