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Test restart#69

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RevathiJambunathan wants to merge 174 commits intoPulsar_BC_CorEInRstar_plus3DR_BdipoleinRstarRevathiJambunathan/WarpX:Pulsar_BC_CorEInRstar_plus3DR_BdipoleinRstarfrom test_restartRevathiJambunathan/WarpX:test_restartCopy head branch name to clipboard

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Commits on May 12, 2021

• adding pulsar as a compiler option

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  56487d8

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• Adding pulsar input and reading pulsar parameters using Don's PR

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• adding input file for pulsar

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• whitespace style fix

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• moved vis from pulsar file to tools

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• scaling notebook to detemine inputs for pulsar

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• removing unwanted file

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  8f7a505

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• added external E and B fields and the appropriate input parameters

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  082ea43

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• EOL whitespace

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  f7f38f9

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• seeting up bounds for pulsar surface

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  ab5f2bb

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• pushing changes for comparison

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  e7c13d6

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• particles injected below surface, dipole magnetic field inside and outside, momentum of all particles is zero, fixed function that applied vacuum EB fields on particles

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  0057ca3

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• add particles based on analytical surface charge density

  RevathiJambunathan

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  a2d091f

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• using local Er and Er_cor to compute particle introduction

  RevathiJambunathan

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  1072fbe

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• fixing particle injection with local Er that includes Er_external

  RevathiJambunathan

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  c911e9f

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• changes to pulsar

  RevathiJambunathan

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  3fe5f39

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• michel and li efields inside and outside star. Particle injection rho_GJ

  RevathiJambunathan

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  3a13a42

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• making changes suggested in the review

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  fb94124

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• removing EOL whitespace

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  9f3907a

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• cleaning

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• adding input parameters to toggle rho gj scaling, ninjection, maxden

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  4c03986

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• removing unwanted insidePulsarBound function

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  48d1a68

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

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  4e0e106

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• Turn on inputs parameter to damp internal E-field for the pulsar setup.

  

  dwillcox

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  7c033b3

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  

  dwillcox

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  274ad57

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  

  dwillcox

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  dcd1d8d

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  

  dwillcox

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  2a52a9f

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• Add comments to distinguish different kinds of momentum injections. Add input parameter for the timescale for ramping up omega.

  

  dwillcox

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  93e87c7

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

  Show description for f92237e
  

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• Add scale factor for damping internal E-field to the inputs file.

  

  dwillcox

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  bb6a12d

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• Add a python script for making plots and a gif from a set of plotfiles.

  

  dwillcox

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  bf9cc10

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• Remove PulsarEBField from PulsarParameters.cpp after a rebase mistake.

  

  dwillcox

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• Default the momentum initialization to 0.

  

  dwillcox

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  0e10b5f

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• Swap tabs for spaces.

  

  dwillcox

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  e1e0fff

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• Ran the style commands suggested by Travis CI to remove trailing whitespace.

  

  dwillcox

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  ff96a08

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• Rename pulsar analysis scripts to make the WarpX style checker happy.

  

  dwillcox

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  16d6993

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• fixing an error in rho_GJ calculation

  RevathiJambunathan

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  aace0ea

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• Upsating GetPosition() based on recent changes in master branch

  RevathiJambunathan

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  ffdfea3

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

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  0cb9603

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  

  dwillcox

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  bfd0e3f

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  

  dwillcox

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  21a52de

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  

  dwillcox

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  ea14d50

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

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• Add a python script for making plots and a gif from a set of plotfiles.

  

  dwillcox

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  cd59aab

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• Undo line removal.

  

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• Undo removal of newline.

  

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  a2edc1f

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• fix compilation error

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  aeae465

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• some more compilation error

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  2badefb

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• Calling External E and B for pulsar from GetExternal functions

  RevathiJambunathan

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  8c0931b

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• a few fixes in the getexternalEB and addplasma to ensure test works

  RevathiJambunathan

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  fabcd99

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• include staggering

  RevathiJambunathan

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  54ea2eb

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• damp b field and include staggering. fix compilation errors

  RevathiJambunathan

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  004d898

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• fixed Ecell

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  33bc560

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• removing particles if inside R_Star

  RevathiJambunathan

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  f978cf6

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• recent input file

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  0896e14

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• eol fix

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  2ec3342

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• Pulsar add external eb (#39)

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  4d596f7

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• update input file to reflect diag.intervals to align with WarpX

  RevathiJambunathan

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  5e42e3d

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• fix typo in quering pulsar input parameter

  RevathiJambunathan

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  2763c27

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• arguments passed to insidePulsarBound must be rmin and rmax

  RevathiJambunathan

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  e8a70d9

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• fix bug by removing semicolon

  RevathiJambunathan

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  76be7ab

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• spherical to cartesian missing phi term. benign for analytical fields

  RevathiJambunathan

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  a3e151c

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• corotatingE must have Rstar

  RevathiJambunathan

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  eae1650

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• add cor E and dipole B and changes for single particle test

  RevathiJambunathan

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  9f7fe2d

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• add particle every timestep

  

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  3a94115

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• add option to perform single particle test

  RevathiJambunathan

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  92b0df5

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• fix bug in line that compares radius with max radius for enforcing E and B fields

  RevathiJambunathan

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• call redistribute right after particle injection

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  bc47612

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Commits on May 13, 2021

• remove unusued coord type for Ext fields

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• Add conversion from cartesian to spherical coord

  RevathiJambunathan

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  e02b486

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• Add Fr Ftheta Fphi EdotB and PoyntingVector diags

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Commits on May 14, 2021

• DampBdipole between inner and outer rings

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Commits on May 24, 2021

• different in theory and sim inside star

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Commits on May 27, 2021

• print to file

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Commits on Jun 1, 2021

• add managed vector and store diags

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• add new input for continuous injection

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• Merge branch 'Pulsar_DebugTheorySim' of https://github.com/RevathiJambunathan/WarpX into Pulsar_DebugTheorySim

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• delete aos host function not required

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  2e31e2d

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Commits on Aug 3, 2021

• local additions to track theory and sim results for single charge and plasma sim. new input flags to turn on theory EB on particles/grid

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  c222726

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Commits on Aug 12, 2021

• ensure new diags work with dynamic load balancing, diff src and dst dmap, counter for particle removal

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Commits on Sep 9, 2021

• merge dev into Pulsar_DebugTheorySim

  RevathiJambunathan

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  12a07fb

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Commits on Sep 10, 2021

• adding pulsar as a compiler option

  RevathiJambunathan

  committed
  e39d19a

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• Adding pulsar input and reading pulsar parameters using Don's PR

  RevathiJambunathan

  committed
  8a5414e

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• adding input file for pulsar

  RevathiJambunathan

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  4b9d6e0

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• whitespace style fix

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  e306f4b

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• moved vis from pulsar file to tools

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  464e760

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• scaling notebook to detemine inputs for pulsar

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  acdba63

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• removing unwanted file

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  60e1659

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• added external E and B fields and the appropriate input parameters

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  5bcedb5

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• EOL whitespace

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  72bcb89

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• seeting up bounds for pulsar surface

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  efc1693

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• pushing changes for comparison

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  9555591

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• particles injected below surface, dipole magnetic field inside and outside, momentum of all particles is zero, fixed function that applied vacuum EB fields on particles

  RevathiJambunathan

  committed
  51a0a1f

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• add particles based on analytical surface charge density

  RevathiJambunathan

  committed
  9869b5d

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• using local Er and Er_cor to compute particle introduction

  RevathiJambunathan

  committed
  fec150e

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• fixing particle injection with local Er that includes Er_external

  RevathiJambunathan

  committed
  32a3a7a

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• changes to pulsar

  RevathiJambunathan

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  45bcf83

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• michel and li efields inside and outside star. Particle injection rho_GJ

  RevathiJambunathan

  committed
  245ec53

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• making changes suggested in the review

  RevathiJambunathan

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  d86b180

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• removing EOL whitespace

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  0dd5e67

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• cleaning

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  5a6a89f

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• adding input parameters to toggle rho gj scaling, ninjection, maxden

  RevathiJambunathan

  committed
  36fe622

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• removing unwanted insidePulsarBound function

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  bfea2ee

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

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  03b2e49

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• Turn on inputs parameter to damp internal E-field for the pulsar setup.

  

  dwillcox

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  9cbf087

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  

  dwillcox

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  a1f6184

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  

  dwillcox

  authored and

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  f760008

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  

  dwillcox

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  02b0643

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• Add comments to distinguish different kinds of momentum injections. Add input parameter for the timescale for ramping up omega.

  

  dwillcox

  authored and

  RevathiJambunathan

  committed
  86f81a8

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

  Show description for da38c66
  

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• Add scale factor for damping internal E-field to the inputs file.

  

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  be3baff

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• Add a python script for making plots and a gif from a set of plotfiles.

  

  dwillcox

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  66b031b

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• Remove PulsarEBField from PulsarParameters.cpp after a rebase mistake.

  

  dwillcox

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  246bc59

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• Default the momentum initialization to 0.

  

  dwillcox

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  6e3d0f3

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• Swap tabs for spaces.

  

  dwillcox

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  9995a51

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• Ran the style commands suggested by Travis CI to remove trailing whitespace.

  

  dwillcox

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  8b2cf88

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• Rename pulsar analysis scripts to make the WarpX style checker happy.

  

  dwillcox

  authored and

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  7c5f76d

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• fixing an error in rho_GJ calculation

  RevathiJambunathan

  committed
  d5ff815

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• Upsating GetPosition() based on recent changes in master branch

  RevathiJambunathan

  committed
  c91cca9

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

  authored and

  RevathiJambunathan

  committed
  23b36f4

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  

  dwillcox

  authored and

  RevathiJambunathan

  committed
  a93b0cf

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  

  dwillcox

  authored and

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  9a62eda

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  

  dwillcox

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  adcf94e

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

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• Add a python script for making plots and a gif from a set of plotfiles.

  

  dwillcox

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  51b0dba

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• Undo line removal.

  

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• Undo removal of newline.

  

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  221f18e

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• fix compilation error

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• some more compilation error

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  dba9f12

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• Calling External E and B for pulsar from GetExternal functions

  RevathiJambunathan

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  7e35a97

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• a few fixes in the getexternalEB and addplasma to ensure test works

  RevathiJambunathan

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  64a6e27

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• include staggering

  RevathiJambunathan

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  7062fb9

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• damp b field and include staggering. fix compilation errors

  RevathiJambunathan

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  0a54dd9

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• fixed Ecell

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  ec0234e

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• removing particles if inside R_Star

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  c575f2a

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• recent input file

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  83b4554

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• eol fix

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  01fc2a5

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• Pulsar add external eb (#39)

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• update input file to reflect diag.intervals to align with WarpX

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  f80f75a

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• fix typo in quering pulsar input parameter

  RevathiJambunathan

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  ee355b5

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• arguments passed to insidePulsarBound must be rmin and rmax

  RevathiJambunathan

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  0b72f2b

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• fix bug by removing semicolon

  RevathiJambunathan

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  bbb6bcc

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• spherical to cartesian missing phi term. benign for analytical fields

  RevathiJambunathan

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  cf42d8e

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• corotatingE must have Rstar

  RevathiJambunathan

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  3d6b7f8

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• Fix conflicts and compilation errors after rebase

  RevathiJambunathan

  committed
  710edfb

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• Adding pulsar input and reading pulsar parameters using Don's PR

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  89186ff

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• added external E and B fields and the appropriate input parameters

  RevathiJambunathan

  committed
  105bc04

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• seeting up bounds for pulsar surface

  RevathiJambunathan

  committed
  43d8659

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• particles injected below surface, dipole magnetic field inside and outside, momentum of all particles is zero, fixed function that applied vacuum EB fields on particles

  RevathiJambunathan

  committed
  9742606

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• using local Er and Er_cor to compute particle introduction

  RevathiJambunathan

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  6817d8f

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

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  RevathiJambunathan

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  9792194

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  

  dwillcox

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  RevathiJambunathan

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  104de0d

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• Calling External E and B for pulsar from GetExternal functions

  RevathiJambunathan

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  0a8b503

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• a few fixes in the getexternalEB and addplasma to ensure test works

  RevathiJambunathan

  committed
  e0bb6f3

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• eol fix

  RevathiJambunathan

  committed
  d51ec05

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• Pulsar add external eb (#39)

  Show description for f16ba38
  

  3 peoplecommitted
  f16ba38

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• add cor E and dipole B and changes for single particle test

  RevathiJambunathan

  committed
  57b0692

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• add particle every timestep

  

  Revathi Jambunathan

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  RevathiJambunathan

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  e246298

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• add option to perform single particle test

  RevathiJambunathan

  committed
  672035f

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• fix bug in line that compares radius with max radius for enforcing E and B fields

  RevathiJambunathan

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  4ee8dcf

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• call redistribute right after particle injection

  RevathiJambunathan

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  367f7fc

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• remove unusued coord type for Ext fields

  RevathiJambunathan

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  a01dcaa

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• Add conversion from cartesian to spherical coord

  RevathiJambunathan

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  5586ed1

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• Add Fr Ftheta Fphi EdotB and PoyntingVector diags

  RevathiJambunathan

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  d61b10c

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• DampBdipole between inner and outer rings

  RevathiJambunathan

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  b059f1b

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• fix compilation error

  RevathiJambunathan

  committed
  07dda4e

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• fix compilation error after rebase with Pulsar_Development

  RevathiJambunathan

  committed
  31b0cb2

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• fix compilation error

  RevathiJambunathan

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  eb56f9a

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Commits on Sep 11, 2021

• Apply suggestions from code review

  RevathiJambunathan

  authored
  ea15c7a

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• fix duplication. particles injected before PIC loop, and removed at the end of the loop

  RevathiJambunathan

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  a254052

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• fix conflicts after merging pulsar_BC_cor

  RevathiJambunathan

  committed
  122f3d8

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• merge conflicts

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  72f01d0

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• trailing conflict

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  7eada22

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• degree to radian

  RevathiJambunathan

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  378c297

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