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Allow database-test to make sample atoms using nitrogen atomTypes
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alongd committed Jun 6, 2017
1 parent bdbf41e commit 46a0053
Showing 1 changed file with 0 additions and 8 deletions.
8 changes: 0 additions & 8 deletions testing/databaseTest.py
Original file line number Diff line number Diff line change
Expand Up @@ -683,14 +683,6 @@ def kinetics_checkSampleDescendsToGroup(self, family_name):
else:
sampleMolecule = entry.item.makeSampleMolecule()

#for now ignore sample atoms that use nitrogen types
nitrogen = False
for atom in sampleMolecule.atoms:
if atom.isNitrogen(): nitrogen = True
if nitrogen:
skipped.append(entryName)
continue

#test accessibility here
atoms = sampleMolecule.getLabeledAtoms()
match = family.groups.descendTree(sampleMolecule, atoms, strict=True, root = root)
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