add gcc to environment file for rdkit #4896
CI.yml
on: push
Matrix: build-and-test
build-and-push-docker
0s
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3 errors and 13 warnings
macos-latest Build and Test Python 3.9
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
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ubuntu-latest Build and Test Python 3.9
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
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macos-13 Build and Test Python 3.9
The action 'Install and link Julia dependencies' has timed out after 120 minutes.
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Mambaforge is now deprecated!
Future Miniforge releases will NOT build Mambaforge installers. We advise you switch to Miniforge at your earliest convenience. More details at https://conda-forge.org/news/2024/07/29/sunsetting-mambaforge/.
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macos-latest Build and Test Python 3.9
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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macos-latest Build and Test Python 3.9
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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macos-latest Build and Test Python 3.9
PackagesNotFoundError: The following packages are not available from current channels:
- cantera::cantera==2.6
- gcc
Current channels:
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/r
- https://conda.anaconda.org/rmg
- https://conda.anaconda.org/conda-forge
- https://conda.anaconda.org/cantera
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
|
Mambaforge is now deprecated!
Future Miniforge releases will NOT build Mambaforge installers. We advise you switch to Miniforge at your earliest convenience. More details at https://conda-forge.org/news/2024/07/29/sunsetting-mambaforge/.
|
ubuntu-latest Build and Test Python 3.9
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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ubuntu-latest Build and Test Python 3.9
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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ubuntu-latest Build and Test Python 3.9
ERROR conda.core.link:_execute(951): An error occurred while installing package 'rmg::gcc-4.8.5-7'.
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ubuntu-latest Build and Test Python 3.9
LinkError: post-link script failed for package rmg::gcc-4.8.5-7
location of failed script: /home/runner/miniconda3/envs/rmg_env/bin/.gcc-post-link.sh
==> script messages <==
<None>
==> script output <==
stdout: Installation failed: gcc is not able to compile a simple 'Hello, World' program.
stderr: No LSB modules are available.
/home/runner/miniconda3/envs/rmg_env/bin/../libexec/gcc/x86_64-unknown-linux-gnu/4.8.5/cc1: error while loading shared libraries: libmpfr.so.4: cannot open shared object file: No such file or directory
return code: 1
()
|
Mambaforge is now deprecated!
Future Miniforge releases will NOT build Mambaforge installers. We advise you switch to Miniforge at your earliest convenience. More details at https://conda-forge.org/news/2024/07/29/sunsetting-mambaforge/.
|
macos-13 Build and Test Python 3.9
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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macos-13 Build and Test Python 3.9
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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macos-13 Build and Test Python 3.9
Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ReadTimeoutError("HTTPSConnectionPool(host='conda.anaconda.org', port=443): Read timed out. (read timeout=60.0)")': /rmg/noarch/periodictable-1.5.2-py_0.tar.bz2
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