mamba to conda (#775) #470
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| name: github pages | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - docs | |
| jobs: | |
| deploy: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Clean Ubuntu Image | |
| uses: kfir4444/free-disk-space@main | |
| with: | |
| # This may remove tools actually needed - currently does not | |
| tool-cache: true | |
| android: true | |
| dotnet: true | |
| haskell: true | |
| large-packages: true | |
| swap-storage: true | |
| - name: Set up miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| environment-file: environment.yml | |
| activate-environment: arc_env | |
| miniconda-version: latest | |
| conda-solver: libmamba | |
| # - name: Update environment | |
| # run: | | |
| # conda env update -n arc_env -f environment.yml | |
| # conda list | |
| - name: Install LaTeX | |
| run: | | |
| sudo apt update -y && sudo apt upgrade -y && sudo apt autoremove -y | |
| sudo apt install texlive-latex-base -y | |
| sudo apt-get install texlive-latex-extra -y | |
| sudo apt-get install -y dvipng | |
| - name: Install codecov | |
| run: conda install --force-reinstall ld_impl_linux-64 -y && conda install -y -c conda-forge codecov | |
| - name: Install dependencies | |
| run: | | |
| export PYTHONPATH=$PYTHONPATH:$(pwd) | |
| conda activate arc_env | |
| cd .. | |
| git clone https://github.com/ReactionMechanismGenerator/RMG-database | |
| git clone https://github.com/ReactionMechanismGenerator/RMG-Py | |
| cd RMG-Py | |
| export PYTHONPATH=$PYTHONPATH:$(pwd) | |
| make | |
| cd ../ARC/ | |
| conda deactivate | |
| - name: Compile docs | |
| run: | | |
| export PYTHONPATH=$PYTHONPATH:$(pwd) | |
| conda activate arc_env | |
| cd ../RMG-Py | |
| export PYTHONPATH=$PYTHONPATH:$(pwd) | |
| cd ../ARC/docs/ | |
| make html | |
| - name: Deploy | |
| uses: peaceiris/[email protected] | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./docs/build/html/ | |
| # https://github.com/marketplace/actions/github-pages-action |