test Calvin solution #463
Workflow file for this run
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| name: github pages | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| - docs | ||
| jobs: | ||
| deploy: | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - name: Clean Ubuntu Image | ||
| uses: kfir4444/free-disk-space@main | ||
| with: | ||
| # This may remove tools actually needed - currently does not | ||
| tool-cache: true | ||
| android: true | ||
| dotnet: true | ||
| haskell: true | ||
| large-packages: true | ||
| swap-storage: true | ||
| - name: Set up miniconda | ||
| uses: conda-incubator/setup-miniconda@v3 | ||
| with: | ||
| auto-update-conda: true | ||
| environment-file: environment.yml | ||
| activate-environment: arc_env | ||
| miniconda-version: latest | ||
| conda-solver: libmamba | ||
| # - name: Setup Mambaforge Python 3.7 | ||
| # uses: conda-incubator/setup-miniconda@v3 | ||
| # with: | ||
| # python-version: 3.7 | ||
| # mamba-version: "*" | ||
| # activate-environment: anaconda-client-env | ||
| # environment-file: environment.yml | ||
| # - name: Update environment | ||
| # run: | | ||
| # mamba env update -n arc_env -f environment.yml | ||
| # conda list | ||
| - name: Install LaTeX | ||
| run: | | ||
| sudo apt update -y && sudo apt upgrade -y && sudo apt autoremove -y | ||
| sudo apt install texlive-latex-base -y | ||
| sudo apt-get install texlive-latex-extra -y | ||
| sudo apt-get install -y dvipng | ||
| - name: Install codecov | ||
| run: mamba install -y -c conda-forge codecov | ||
| - name: Install dependencies | ||
| run: | | ||
| echo 'export PYTHONPATH=$PYTHONPATH:'"$(pwd)" >> $GITHUB_ENV | ||
| echo 'export PATH=$PATH:'"$(pwd)" >> $GITHUB_ENV | ||
| cd .. | ||
| git clone https://github.com/ReactionMechanismGenerator/RMG-database | ||
| git clone https://github.com/ReactionMechanismGenerator/RMG-Py | ||
| cd RMG-Py | ||
| echo 'export PYTHONPATH=$PYTHONPATH:'"$(pwd)" >> $GITHUB_ENV | ||
| echo 'export PATH=$PATH:'"$(pwd)" >> $GITHUB_ENV | ||
| conda activate arc_env && make | ||
| cd ../ARC/ | ||
| - name: Compile docs | ||
| run: | | ||
| echo 'export PYTHONPATH=$PYTHONPATH:'"$(pwd)" >> $GITHUB_ENV | ||
| echo 'export PATH=$PATH:'"$(pwd)" >> $GITHUB_ENV | ||
| conda activate arc_env | ||
| cd ../RMG-Py | ||
| echo 'export PYTHONPATH=$PYTHONPATH:'"$(pwd)" >> $GITHUB_ENV | ||
| echo 'export PATH=$PATH:'"$(pwd)" >> $GITHUB_ENV | ||
| cd ../ARC/docs/ | ||
| conda activate arc_env && make html | ||
| - name: Deploy | ||
| uses: peaceiris/[email protected] | ||
| with: | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| publish_dir: ./docs/build/html/ | ||
| # https://github.com/marketplace/actions/github-pages-action | ||
