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🎨 update miniconda
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- list files in project folder (to check if .snakemake is deleted)
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enryH committed Aug 8, 2024
1 parent d6661dc commit babb008
Showing 1 changed file with 4 additions and 6 deletions.
10 changes: 4 additions & 6 deletions .github/workflows/workflow_website.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -19,17 +19,14 @@ jobs:
uses: actions/checkout@v4
- name: Set up Miniconda
# ! change action https://github.com/mamba-org/setup-micromamba
uses: conda-incubator/setup-miniconda@v2
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-variant: Mambaforge
# miniforge-version: latest
use-mamba: true
channel-priority: disabled
python-version: "3.8"
# channel-priority: true
python-version: "3.10"
environment-file: snakemake_env.yml
activate-environment: snakemake
auto-activate-base: true
# auto-update-conda: true
- name: Dry-run workflow
run: |
cd project
Expand Down Expand Up @@ -57,6 +54,7 @@ jobs:
conda clean -a -y
cd project
rm -r .snakemake
ls -la
- name: Install website dependencies
run: |
pip install .[docs]
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