🐛 see if it works without MSIMPUTE packages (which fail to install)

... after bioconductor update (only on Ubuntu, not on Mac) ?
RasmussenLab · Dec 23, 2024 · 2c74ca3 · 2c74ca3
1 parent 6986e38
commit 2c74ca3
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diff --git a/project/config/alzheimer_study/config.yaml b/project/config/alzheimer_study/config.yaml
@@ -67,8 +67,8 @@ NAGuideR_methods:
     - MINIMUM
     - MINPROB
     - MLE
-    - MSIMPUTE
-    - MSIMPUTE_MNAR
+#     - MSIMPUTE
+#     - MSIMPUTE_MNAR
     - PI
     - QRILC
     - RF

diff --git a/project/config/single_dev_dataset/example/config.yaml b/project/config/single_dev_dataset/example/config.yaml
@@ -23,5 +23,5 @@ NAGuideR_methods:
   - MLE # norm
   - IRM # VIM - ~9mins
   - TRKNN
-  - MSIMPUTE # MSIMPUTE_MNAR is slower
+  # - MSIMPUTE # MSIMPUTE_MNAR is slower
   # - GSIMP # slow even on data with fewer features (~44mins)