deploy: e9bbecc

_modules/pylops_mpi/optimization/cls_basic.html

@@ -431,8 +431,9 @@
 
   <h1>Source code for pylops_mpi.optimization.cls_basic</h1><div class="highlight"><pre>
 <span></span><span class="kn">from</span> <span class="nn">typing</span> <span class="kn">import</span> <span class="n">List</span><span class="p">,</span> <span class="n">Optional</span><span class="p">,</span> <span class="n">Tuple</span><span class="p">,</span> <span class="n">Union</span>
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+<span class="kn">import</span> <span class="nn">sys</span>
 <span class="kn">import</span> <span class="nn">time</span>
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
 
 <span class="kn">from</span> <span class="nn">pylops.optimization.basesolver</span> <span class="kn">import</span> <span class="n">Solver</span>
 <span class="kn">from</span> <span class="nn">pylops.utils</span> <span class="kn">import</span> <span class="n">NDArray</span>
@@ -474,13 +475,15 @@ <h1>Source code for pylops_mpi.optimization.cls_basic</h1><div class="highlight"
         <span class="k">else</span><span class="p">:</span>
             <span class="n">head1</span> <span class="o">=</span> <span class="s2">&quot;    Itn              x[0]                  r2norm&quot;</span>
         <span class="nb">print</span><span class="p">(</span><span class="n">head1</span><span class="p">)</span>
+        <span class="n">sys</span><span class="o">.</span><span class="n">stdout</span><span class="o">.</span><span class="n">flush</span><span class="p">()</span>
 
     <span class="k">def</span> <span class="nf">_print_step</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">:</span> <span class="n">Union</span><span class="p">[</span><span class="n">DistributedArray</span><span class="p">,</span> <span class="n">StackedDistributedArray</span><span class="p">])</span> <span class="o">-&gt;</span> <span class="kc">None</span><span class="p">:</span>
         <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">StackedDistributedArray</span><span class="p">):</span>
             <span class="n">x</span> <span class="o">=</span> <span class="n">x</span><span class="o">.</span><span class="n">distarrays</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
         <span class="n">strx</span> <span class="o">=</span> <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="n">x</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="si">:</span><span class="s2">1.2e</span><span class="si">}</span><span class="s2">        &quot;</span> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">iscomplexobj</span><span class="p">(</span><span class="n">x</span><span class="o">.</span><span class="n">local_array</span><span class="p">)</span> <span class="k">else</span> <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="n">x</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="si">:</span><span class="s2">11.4e</span><span class="si">}</span><span class="s2">        &quot;</span>
         <span class="n">msg</span> <span class="o">=</span> <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="bp">self</span><span class="o">.</span><span class="n">iiter</span><span class="si">:</span><span class="s2">6g</span><span class="si">}</span><span class="s2">        &quot;</span> <span class="o">+</span> <span class="n">strx</span> <span class="o">+</span> <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="bp">self</span><span class="o">.</span><span class="n">cost</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">iiter</span><span class="p">]</span><span class="si">:</span><span class="s2">11.4e</span><span class="si">}</span><span class="s2">&quot;</span>
         <span class="nb">print</span><span class="p">(</span><span class="n">msg</span><span class="p">)</span>
+        <span class="n">sys</span><span class="o">.</span><span class="n">stdout</span><span class="o">.</span><span class="n">flush</span><span class="p">()</span>
 
     <span class="k">def</span> <span class="nf">setup</span><span class="p">(</span>
             <span class="bp">self</span><span class="p">,</span>
@@ -718,6 +721,7 @@ <h1>Source code for pylops_mpi.optimization.cls_basic</h1><div class="highlight"
         <span class="k">else</span><span class="p">:</span>
             <span class="n">head1</span> <span class="o">=</span> <span class="s2">&quot;    Itn             x[0]             r1norm         r2norm&quot;</span>
         <span class="nb">print</span><span class="p">(</span><span class="n">head1</span><span class="p">)</span>
+        <span class="n">sys</span><span class="o">.</span><span class="n">stdout</span><span class="o">.</span><span class="n">flush</span><span class="p">()</span>
 
     <span class="k">def</span> <span class="nf">_print_step</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">:</span> <span class="n">Union</span><span class="p">[</span><span class="n">DistributedArray</span><span class="p">,</span> <span class="n">StackedDistributedArray</span><span class="p">])</span> <span class="o">-&gt;</span> <span class="kc">None</span><span class="p">:</span>
         <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">StackedDistributedArray</span><span class="p">):</span>
@@ -729,6 +733,7 @@ <h1>Source code for pylops_mpi.optimization.cls_basic</h1><div class="highlight"
             <span class="o">+</span> <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="bp">self</span><span class="o">.</span><span class="n">cost</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">iiter</span><span class="p">]</span><span class="si">:</span><span class="s2">11.4e</span><span class="si">}</span><span class="s2">    </span><span class="si">{</span><span class="bp">self</span><span class="o">.</span><span class="n">cost1</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">iiter</span><span class="p">]</span><span class="si">:</span><span class="s2">11.4e</span><span class="si">}</span><span class="s2">&quot;</span>
         <span class="p">)</span>
         <span class="nb">print</span><span class="p">(</span><span class="n">msg</span><span class="p">)</span>
+        <span class="n">sys</span><span class="o">.</span><span class="n">stdout</span><span class="o">.</span><span class="n">flush</span><span class="p">()</span>
 
     <span class="k">def</span> <span class="nf">setup</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span>
               <span class="n">y</span><span class="p">:</span> <span class="n">Union</span><span class="p">[</span><span class="n">DistributedArray</span><span class="p">,</span> <span class="n">StackedDistributedArray</span><span class="p">],</span>

_sources/gallery/plot_cgls.rst.txt

@@ -170,7 +170,7 @@ function of the DistributedArray as shown below.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.181 seconds)
+   **Total running time of the script:** (0 minutes 0.176 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_cgls.py:

_sources/gallery/plot_derivative.rst.txt

@@ -262,7 +262,7 @@ dimensions and concatenates them.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 1.360 seconds)
+   **Total running time of the script:** (0 minutes 1.329 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_derivative.py:

_sources/gallery/plot_distributed_array.rst.txt

@@ -472,7 +472,7 @@ And finally with 2d-arrays distributed over axis=0
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 1.537 seconds)
+   **Total running time of the script:** (0 minutes 1.504 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_distributed_array.py:

_sources/gallery/plot_mdc.rst.txt

@@ -273,7 +273,7 @@ Finally let's display input model, data and adjoint model
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.482 seconds)
+   **Total running time of the script:** (0 minutes 0.481 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_mdc.py:

_sources/gallery/plot_mpilinop.rst.txt

@@ -214,7 +214,7 @@ to ensure that the operators align appropriately with their corresponding
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.357 seconds)
+   **Total running time of the script:** (0 minutes 0.349 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_mpilinop.py:

_sources/gallery/plot_stacking.rst.txt

@@ -279,7 +279,7 @@ corresponding vector :math:`x`.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.456 seconds)
+   **Total running time of the script:** (0 minutes 0.428 seconds)
 
 
 .. _sphx_glr_download_gallery_plot_stacking.py:

_sources/gallery/sg_execution_times.rst.txt

@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:04.391** total execution time for 7 files **from gallery**:
+**00:04.284** total execution time for 7 files **from gallery**:
 
 .. container::
 
@@ -33,22 +33,22 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_gallery_plot_distributed_array.py` (``plot_distributed_array.py``)
-     - 00:01.537
+     - 00:01.504
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_derivative.py` (``plot_derivative.py``)
-     - 00:01.360
+     - 00:01.329
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_mdc.py` (``plot_mdc.py``)
-     - 00:00.482
+     - 00:00.481
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_stacking.py` (``plot_stacking.py``)
-     - 00:00.456
+     - 00:00.428
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_mpilinop.py` (``plot_mpilinop.py``)
-     - 00:00.357
+     - 00:00.349
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_cgls.py` (``plot_cgls.py``)
-     - 00:00.181
+     - 00:00.176
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_stacked_array.py` (``plot_stacked_array.py``)
      - 00:00.017

_sources/sg_execution_times.rst.txt

@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**02:28.821** total execution time for 10 files **from all galleries**:
+**02:25.994** total execution time for 10 files **from all galleries**:
 
 .. container::
 
@@ -33,31 +33,31 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_tutorials_poststack.py` (``../../tutorials/poststack.py``)
-     - 02:19.126
+     - 02:16.540
      - 0.0
    * - :ref:`sphx_glr_tutorials_lsm.py` (``../../tutorials/lsm.py``)
-     - 00:03.245
+     - 00:03.165
      - 0.0
    * - :ref:`sphx_glr_tutorials_mdd.py` (``../../tutorials/mdd.py``)
-     - 00:02.058
+     - 00:02.005
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_distributed_array.py` (``../../examples/plot_distributed_array.py``)
-     - 00:01.537
+     - 00:01.504
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_derivative.py` (``../../examples/plot_derivative.py``)
-     - 00:01.360
+     - 00:01.329
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_mdc.py` (``../../examples/plot_mdc.py``)
-     - 00:00.482
+     - 00:00.481
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_stacking.py` (``../../examples/plot_stacking.py``)
-     - 00:00.456
+     - 00:00.428
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_mpilinop.py` (``../../examples/plot_mpilinop.py``)
-     - 00:00.357
+     - 00:00.349
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_cgls.py` (``../../examples/plot_cgls.py``)
-     - 00:00.181
+     - 00:00.176
      - 0.0
    * - :ref:`sphx_glr_gallery_plot_stacked_array.py` (``../../examples/plot_stacked_array.py``)
      - 00:00.017

_sources/tutorials/lsm.rst.txt

@@ -304,7 +304,7 @@ solver.
         99       -1.2546e-02         2.8528e+00     2.8528e+00
        100       -1.2389e-02         2.8342e+00     2.8342e+00
 
-    Iterations = 100        Total time (s) = 1.24
+    Iterations = 100        Total time (s) = 1.21
     -----------------------------------------------------------------
 
 
@@ -385,7 +385,7 @@ solver.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 3.245 seconds)
+   **Total running time of the script:** (0 minutes 3.165 seconds)
 
 
 .. _sphx_glr_download_tutorials_lsm.py:

_sources/tutorials/mdd.rst.txt

@@ -367,7 +367,7 @@ back for our input model
         49       0.00e+00+0.00e+00j    3.7578e-01     3.7578e-01
         50       0.00e+00+0.00e+00j    3.6788e-01     3.6788e-01
 
-    Iterations = 50        Total time (s) = 1.18
+    Iterations = 50        Total time (s) = 1.14
     -----------------------------------------------------------------
 
 
@@ -377,7 +377,7 @@ back for our input model
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 2.058 seconds)
+   **Total running time of the script:** (0 minutes 2.005 seconds)
 
 
 .. _sphx_glr_download_tutorials_mdd.py:

_sources/tutorials/poststack.rst.txt

@@ -284,7 +284,7 @@ normal equations, and :math:`\mathbf{d}^{Norm}` is the data of the normal equati
         99        6.1544e-01         6.5026e-01     6.5026e-01
        100        6.1561e-01         6.4212e-01     6.4212e-01
 
-    Iterations = 100        Total time (s) = 29.55
+    Iterations = 100        Total time (s) = 29.31
     -----------------------------------------------------------------
 
 
@@ -349,7 +349,7 @@ normal equations, and :math:`\mathbf{d}^{Norm}` is the data of the normal equati
         99         6.3033e-01         1.9903e+02
        100         6.3026e-01         1.9777e+02
 
-    Iterations = 100        Total time (s) = 44.68
+    Iterations = 100        Total time (s) = 43.79
     -------------------------------------------------------
 
 
@@ -481,7 +481,7 @@ Finally, we display the modeling and inversion results
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (2 minutes 19.126 seconds)
+   **Total running time of the script:** (2 minutes 16.540 seconds)
 
 
 .. _sphx_glr_download_tutorials_poststack.py:

_sources/tutorials/sg_execution_times.rst.txt

@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**02:24.429** total execution time for 3 files **from tutorials**:
+**02:21.710** total execution time for 3 files **from tutorials**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_tutorials_poststack.py` (``poststack.py``)
-     - 02:19.126
+     - 02:16.540
      - 0.0
    * - :ref:`sphx_glr_tutorials_lsm.py` (``lsm.py``)
-     - 00:03.245
+     - 00:03.165
      - 0.0
    * - :ref:`sphx_glr_tutorials_mdd.py` (``mdd.py``)
-     - 00:02.058
+     - 00:02.005
      - 0.0

gallery/plot_cgls.html

@@ -544,7 +544,7 @@
  0.99999999 1.         0.99999996]
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.181 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.176 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-gallery-plot-cgls-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/59790902f856f463297d6568e11254ee/plot_cgls.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_cgls.ipynb</span></code></a></p>

gallery/plot_derivative.html

@@ -612,7 +612,7 @@
     <a href="https://matplotlib.org/stable/api/_as_gen/matplotlib.pyplot.tight_layout.html#matplotlib.pyplot.tight_layout" title="matplotlib.pyplot.tight_layout" class="sphx-glr-backref-module-matplotlib-pyplot sphx-glr-backref-type-py-function"><span class="n">plt</span><span class="o">.</span><span class="n">tight_layout</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<img src="../_images/sphx_glr_plot_derivative_004.png" srcset="../_images/sphx_glr_plot_derivative_004.png" alt="Gradient, x, y - 1st direction, xadj, y - 2nd direction" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 1.360 seconds)</p>
+<img src="../_images/sphx_glr_plot_derivative_004.png" srcset="../_images/sphx_glr_plot_derivative_004.png" alt="Gradient, x, y - 1st direction, xadj, y - 2nd direction" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 1.329 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-gallery-plot-derivative-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/ead31515400e409f5d089473defad207/plot_derivative.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_derivative.ipynb</span></code></a></p>

gallery/plot_distributed_array.html

@@ -673,7 +673,7 @@
 Norm check (Rank 0): True
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 1.537 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 1.504 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-gallery-plot-distributed-array-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/82a21537237fa28c9fd15bc39c8c4644/plot_distributed_array.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_distributed_array.ipynb</span></code></a></p>

gallery/plot_mdc.html

@@ -628,7 +628,7 @@
     <a href="https://matplotlib.org/stable/api/_as_gen/matplotlib.figure.Figure.tight_layout.html#matplotlib.figure.Figure.tight_layout" title="matplotlib.figure.Figure.tight_layout" class="sphx-glr-backref-module-matplotlib-figure sphx-glr-backref-type-py-method"><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<img src="../_images/sphx_glr_plot_mdc_001.png" srcset="../_images/sphx_glr_plot_mdc_001.png" alt="$m$, $d$, $m_{adj}$" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.482 seconds)</p>
+<img src="../_images/sphx_glr_plot_mdc_001.png" srcset="../_images/sphx_glr_plot_mdc_001.png" alt="$m$, $d$, $m_{adj}$" class = "sphx-glr-single-img"/><p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.481 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-gallery-plot-mdc-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../_downloads/362759280e7da1da646cf3ebf1935931/plot_mdc.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_mdc.ipynb</span></code></a></p>