Support python 3.12 (#1772)

Signed-off-by: Sachidanand Alle <[email protected]>

.github/workflows/pythonapp.yml

@@ -32,7 +32,7 @@ jobs:
     strategy:
       matrix:
         os: [windows-latest, ubuntu-latest]
-        python-version: ["3.9", "3.10", "3.11"]
+        python-version: ["3.9", "3.10", "3.11", "3.12"]
     steps:
       - uses: actions/checkout@v4
       - name: Set up Python
@@ -50,7 +50,7 @@ jobs:
       MONAI_ZOO_AUTH_TOKEN: ${{ github.token }}
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11"]
+        python-version: ["3.9", "3.10", "3.11", "3.12"]
     steps:
       - uses: actions/checkout@v4
       - name: Set up Python
@@ -83,7 +83,7 @@ jobs:
       MONAI_ZOO_AUTH_TOKEN: ${{ github.token }}
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11"]
+        python-version: ["3.9", "3.10", "3.11", "3.12"]
     steps:
       - uses: actions/checkout@v4
         with:

Dockerfile

@@ -14,19 +14,18 @@
 # to use different version of MONAI pass `--build-arg MONAI_IMAGE=...`
 
 ARG MONAI_IMAGE=projectmonai/monai:1.4.0
-
 ARG NODE_IMAGE=node:slim
 
-FROM ${NODE_IMAGE} as ohifbuild
-ADD . /opt/monailabel
+FROM ${NODE_IMAGE} AS ohifbuild
+ADD ./plugins/ohifv3 /opt/ohifv3
 RUN apt update -y && apt install -y git
-RUN cd /opt/monailabel/plugins/ohifv3 && ./build.sh
+RUN cd /opt/ohifv3 && ./build.sh /opt/ohifv3/release
 
-FROM ${MONAI_IMAGE} as build
+FROM ${MONAI_IMAGE} AS build
 LABEL maintainer="[email protected]"
 
 ADD . /opt/monailabel/
-COPY --from=ohifbuild /opt/monailabel/monailabel/endpoints/static/ohif /opt/monailabel/monailabel/endpoints/static/ohif
+COPY --from=ohifbuild /opt/ohifv3/release /opt/monailabel/monailabel/endpoints/static/ohif
 RUN python -m pip install --upgrade --no-cache-dir pip setuptools wheel twine \
     && cd /opt/monailabel \
     && BUILD_OHIF=false python setup.py sdist bdist_wheel --build-number $(date +'%Y%m%d%H%M')

requirements.txt

@@ -28,7 +28,7 @@ pydicom==2.4.4
 pydicom-seg==0.4.1
 pynetdicom==2.0.2
 pynrrd==1.0.0
-numpymaxflow==0.0.6
+numpymaxflow==0.0.7
 girder-client==3.2.3
 ninja==1.11.1.1
 einops==0.7.0

setup.cfg

@@ -54,7 +54,7 @@ install_requires =
     pydicom-seg>=0.4.1
     pynetdicom>=2.0.2
     pynrrd>=1.0.0
-    numpymaxflow>=0.0.6
+    numpymaxflow>=0.0.7
     girder-client>=3.2.3
     ninja>=1.11.1.1
     einops>=0.7.0