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Containerize the segmenter #17

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merged 69 commits into from
Jan 18, 2024
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This PR makes progress on PlanktoScope/PlanktoScope#326 by building and pushing a Docker container image for the segmenter.

@ethanjli ethanjli force-pushed the feature/segmenter-containerization branch from 81934b3 to 60e4cbf Compare January 17, 2024 03:48
@ethanjli
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I tested this as part of PlanktoScope/PlanktoScope#352 and was able to run a segmentation from start to finish, and I also confirmed that log files were being written as expected. So I consider this PR good enough to merge.

@ethanjli ethanjli merged commit 3fb8e38 into main Jan 18, 2024
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@ethanjli ethanjli deleted the feature/segmenter-containerization branch January 18, 2024 02:16
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