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Update qsirecon/workflows/recon/converters.py
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Co-authored-by: Taylor Salo <[email protected]>
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mattcieslak and tsalo authored Dec 17, 2024
1 parent ab45d81 commit 70d0409
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions qsirecon/workflows/recon/converters.py
Original file line number Diff line number Diff line change
Expand Up @@ -134,15 +134,17 @@ def init_fod_fib_wf(inputs_dict, name="fod_fib", qsirecon_suffix="", params={}):
workflow.connect([
(inputnode, convert_fod_to_fib, [
('fod_sh_mif', 'mif_file'),
('dwi_mask', 'mask_file')]),
('dwi_mask', 'mask_file'),
]),
(inputnode, merge_fod_and_qgi_fibs, [
('fibgz', 'reference_fib_file'),
('fibgz_map', 'fibgz_map')]),
('fibgz_map', 'fibgz_map'),
]),
(convert_fod_to_fib, merge_fod_and_qgi_fibs, [('fib_file', 'csd_fib_file')]),
(merge_fod_and_qgi_fibs, outputnode, [
('fibgz_map', 'fibgz_map'),
('fibgz', 'fibgz'),
])
]),
]) # fmt:skip

if qsirecon_suffix:
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