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update 'Other detailed instructions' in zip_foldernames section docs
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Chenying Zhao committed Jul 25, 2023
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14 changes: 10 additions & 4 deletions docs/source/preparation_config_yaml_file.rst
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Expand Up @@ -480,13 +480,19 @@ Other detailed instructions
---------------------------------

* The version number should be consistent as that in *image NAME* when :ref:`create-a-container-datalad-dataset`.
For this example, you probably use ``fmriprep-20-2-3`` for *image NAME*.
* When calling ``babs-init``, argument ``--container-name`` should use the same version too,
i.e., ``--container-name fmriprep-20-2-3`` for current example.

* In example #1, you probably use ``fmriprep-20-2-3`` for *image NAME*;
* In example #2, you probably use ``fmriprep-23-1-3`` for *image NAME*.

* When calling ``babs-init``, argument ``--container-name`` should use the same version too, i.e.,

* ``--container-name fmriprep-20-2-3`` in example #1;
* ``--container-name fmriprep-23-1-3`` in example #2;

* Please use dashes ``-`` instead of dots ``.`` when indicating the version number,
e.g., ``20-2-3`` instead of ``20.2.3``.
* If there are multiple folders to zip, we recommend using the consistent version string across these folders.
In this example case, the ``fMRIPrep`` BIDS App's version is ``20.2.3``, so we specify ``20-2-3`` for
In example #1, the ``fMRIPrep`` BIDS App's version is ``20.2.3``, so we specify ``20-2-3`` for
both folders ``fmriprep`` and ``freesurfer``,
although the version of ``FreeSurfer`` included in this ``fMRIPrep`` may not be ``20.2.3``.

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