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v1.2.2
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@dportik dportik released this 08 Oct 20:08
· 276 commits to master since this release
v1.2.2
7ac8224

Issues were addressed that were caused by differences from snakemake v4.8 to 5+:

  • Genome-Binning-Pipeline: In rule RunMetabat the output was changed from 2-metabat-bins/{sample}/completed.txt to 2-metabat-bins/{sample}.completed.txt so that it is no longer contained in the simultaneously created output directory. This eliminated a ChildIOException error. It was tested with snakemake v5.4 and v5.19.
  • Genome-Binning-Pipeline: Directories that are outputs from a rule are explicitly labeled with the directory() syntax to prevent errors in snakemake v5+. Tested with v5.19.

Documentation now explicitly states requirements for snakemake v5+, with 5.19.+ recommended.

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