Merge pull request #18 from PacificBiosciences/d6_patch_20240712

change log updates for v0.11.2

CHANGELOG.md

@@ -1,8 +1,17 @@
+# v0.11.2
+## Changes
+- Added a penalty for CYP2D6 haplotypes composed of only hybrid alleles that are expected to be found paired with another allele
+- Relaxed the requirements for CYP2D6 chain inferrence to allow for more inferred connections when observed connections are missing
+
+## Fixed
+- Fixed a bug where chains connecting from some region to REP6 were not being penalized (e.g., REP6 should always start a chain)
+- Fixed a residual bug where a poorly mapping read in an HLA region would fail to match any alleles in the database and cause a panic
+
 # v0.11.1
 ## Fixed
 - Fixed a bug where empty haplotypes were treated as valid candidates and then reported as part of the diplotype
 - Revised inferred chain logic to remove erroneous inferrences and add missing inferrences
-- Fixed a bug where a poorly mapping read in an HLA reigon would fail to match any alleles in the database and cause a panic
+- Fixed a bug where a poorly mapping read in an HLA region would fail to match any alleles in the database and cause a panic
 
 # v0.11.0
 ## Changes