v0.9-alpha
Pre-release
Pre-release
proteinosome
released this
23 Dec 02:49
·
1 commit
to v0.9_dev
since this release
v0.9 changelog
- Refactored codes, split sections into modules
- Added GreenGenes 2024.10, updated GTDB to r220, and Silva to 138.2, please rerun download_db to get the latest version
- Added new parameter
--db_to_prioritize
to allow users to specify which database to prioritize for taxonomy assignment.- Prioritization of assignment by default is now GG2, then GTDB, then Silva.
- Attempt to make tmpdir and cachedir more robust for QIIME2-related processes
- TMPDIR is now set to the current working directory
- Update QIIME2 to 2024.10 version. Workflow tested with Nextflow 24.11.0
- Switched to using QIIME2 official container instead of self-built one.