added files to data branch.

PNNL-CompBio · Jan 17, 2024 · 0cf6a05 · 0cf6a05
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commit 0cf6a05
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Showing 39 changed files with 686,404 additions and 830 deletions.
diff --git a/bmd2Samps/Dockerfile b/bmd2Samps/Dockerfile
@@ -8,4 +8,4 @@ COPY . bmd2Samps
 WORKDIR bmd2Samps
 
 ENTRYPOINT ["Rscript","buildv1database.R"]
-VOLUME ["/tmp"]
+VOLUME ["/tmp"]
diff --git a/bmd2Samps/buildv1database.R b/bmd2Samps/buildv1database.R
diff --git a/data/CCD-Batch-Search_2022-01-26_10_28_30.xlsx b/data/CCD-Batch-Search_2022-01-26_10_28_30.xlsx
diff --git a/data/ChemicalDescriptions.xlsx b/data/ChemicalDescriptions.xlsx
diff --git a/data/CompToxChemicalsDashboard-Batch-Search_2021-11-05_17_57_46.xlsx b/data/CompToxChemicalsDashboard-Batch-Search_2021-11-05_17_57_46.xlsx
diff --git a/data/Dockerfile b/data/Dockerfile
@@ -10,7 +10,7 @@ RUN /usr/local/bin/python -m pip install --upgrade pip
 RUN pip3 install -r /requirements.txt
 
 ADD *.py .
-ADD *.csv .
+ADD srp_build_files.csv .
 
 ENTRYPOINT ["python3", "get_build_files.py"]
 VOLUME ["/tmp"]
diff --git a/data/MASV Classifications 2021.xlsx b/data/MASV Classifications 2021.xlsx
diff --git a/data/PAH_and_1530_SRP_Summary.xlsx b/data/PAH_and_1530_SRP_Summary.xlsx
diff --git a/data/README.md b/data/README.md
@@ -0,0 +1,9 @@
+## Data directory
+This directory contains existing data and references files to be added to the SRP analytics database. These data are not private in any way, but mainly serve as reference files for the broader repository.
+
+### Chemical reference information
+
+### Environmental sample information
+
+### Existing Zebrafish data
+
diff --git a/data/SuperEndpoint Mapping 2021NOV04.xlsx b/data/SuperEndpoint Mapping 2021NOV04.xlsx