Merge branch 'master' into master

OpenMS · Jan 17, 2025 · c0ceff0 · c0ceff0
2 parents e31a5ac + c45501b
commit c0ceff0
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Showing 3 changed files with 65 additions and 4 deletions.
diff --git a/recipes/biobb_haddock/meta.yaml b/recipes/biobb_haddock/meta.yaml
@@ -1,6 +1,7 @@
 {% set name = "biobb_haddock" %}
 {% set version = "5.0.0" %}
 
+
 package:
   name: "{{ name|lower }}"
   version: "{{ version }}"
@@ -10,7 +11,7 @@ source:
   sha256: 6a41e63280f577e16e923bc1027967c37a3dfca823cc21803324c6fe33786bb8
 
 build:
-  number: 0
+  number: 1
   noarch: python
   script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed --no-cache-dir -vvv"
   run_exports:
@@ -24,6 +25,8 @@ requirements:
   run:
     - python >=3.9
     - biobb_common ==5.0.0
+  command:
+    - pip install haddock3 --no-deps
 
 test:
   imports:

diff --git a/recipes/predictosaurus/meta.yaml b/recipes/predictosaurus/meta.yaml
@@ -1,4 +1,4 @@
-{% set version = "0.2.6" %}
+{% set version = "0.2.9" %}
 
 package:
   name: predictosaurus
@@ -11,7 +11,7 @@ build:
 
 source:
   url: https://github.com/fxwiegand/predictosaurus/archive/refs/tags/v{{ version }}.tar.gz
-  sha256: b560bcf2b7a70e282152e8274f01ba09bc3f116f442f94c5a065c8975d05e0c4
+  sha256: bf33ca79f8f2b9e1fa500c6f4421ebf59966eb154ad81bbda85a2cc344cb031c
 
 requirements:
   build:
@@ -26,7 +26,8 @@ requirements:
     - gsl
     - libcblas
     - libcurl
-    - openssl
+    - openssl # [not osx]
+    - clangdev
 
 test:
   commands:

diff --git a/recipes/qimba/meta.yaml b/recipes/qimba/meta.yaml
@@ -0,0 +1,57 @@
+{% set name = "qimba" %}
+{% set version = "0.4.0" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+build:
+  noarch: python
+  script: {{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv
+  number: 0
+  run_exports:
+    - {{ pin_subpackage(name, max_pin='x.x') }}
+
+source:
+  url: https://github.com/quadram-institute-bioscience/{{ name }}/archive/refs/tags/v{{ version }}.tar.gz
+  sha256: b08f8ac39b15be7d4a5d70ff9f855df2ebb9c63ee474b32406e8af859f4816fc
+
+requirements:
+  host:
+    - pip
+    - python >=3.9
+    - setuptools >=64.0
+  run:
+    - click >=8.0
+    - dnaio >=1.1
+    - configparser
+    - xopen >=2.0 
+    - python >=3.9
+    - seqfu >1.20
+    - pandas >=2.0.0
+    - cd-hit >=4.8.1
+    - fastp
+    - cutadapt >=3.5
+    - usearch
+    - kraken2 
+    - minimap2 >=2.1
+    - mafft >=7.0
+    - fasttree >=2.0
+
+test:
+  imports:
+    - qimba
+  commands:
+    - qimba version | grep {{ version }}
+  requires:
+    - pip
+
+about:
+  home: https://github.com/quadram-institute-bioscience/qimba
+  summary: Toolkit for metabarcoding analyses
+  license: MIT
+
+
+extra:
+  recipe-maintainers:
+    - telatin