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update README.md
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longrw committed Aug 3, 2018
1 parent a7e2e75 commit 232dd09
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -50,13 +50,13 @@ For single-end mode:
repaq -c -i in.fq -o out.rfq

# decompress
repaq -c -i in.rfq -o out.fq
repaq -d -i in.rfq -o out.fq
```

For paired-end mode:
```shell
# compress
repaq -d -i in.R1.fq -I in.R2.fq -o out.rfq
repaq -c -i in.R1.fq -I in.R2.fq -o out.rfq

# decompress
repaq -d -i in.rfq -o out.R1.fq -O out.R2.fq
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