Merge pull request #3 from OmicsML/SpatialCTD-v1

update pseduo spot generation on CosMx lung dataset-v1
OmicsML · Jan 18, 2024 · 43af11b · 43af11b
2 parents 10b3c66 + 9624b94
commit 43af11b
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Showing 9 changed files with 39,650 additions and 196,777 deletions.
diff --git a/pseudo_spot_generation/.DS_Store b/pseudo_spot_generation/.DS_Store
diff --git a/pseudo_spot_generation/lung/Lung12_generate.ipynb b/pseudo_spot_generation/lung/Lung12_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung13_generate.ipynb b/pseudo_spot_generation/lung/Lung13_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung5_Rep1_generate.ipynb b/pseudo_spot_generation/lung/Lung5_Rep1_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung5_Rep2_generate.ipynb b/pseudo_spot_generation/lung/Lung5_Rep2_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung5_Rep3_generate.ipynb b/pseudo_spot_generation/lung/Lung5_Rep3_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung6_generate.ipynb b/pseudo_spot_generation/lung/Lung6_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung9_Rep1_generate.ipynb b/pseudo_spot_generation/lung/Lung9_Rep1_generate.ipynb
diff --git a/pseudo_spot_generation/lung/Lung9_Rep2_generate.ipynb b/pseudo_spot_generation/lung/Lung9_Rep2_generate.ipynb