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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 912 457

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 229 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 277 139

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 33

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 60

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 189 90

Repositories

Showing 10 of 319 repositories
  • OHDSI/CohortConstructor’s past year of commit activity
    R 1 Apache-2.0 0 39 3 Updated Jan 29, 2025
  • DatabaseConnector Public

    An R package for connecting to databases using JDBC.

    OHDSI/DatabaseConnector’s past year of commit activity
    R 55 84 32 (1 issue needs help) 2 Updated Jan 29, 2025
  • OHDSI/TheBookOfOhdsiInJapanese’s past year of commit activity
    R 0 CC0-1.0 0 0 0 Updated Jan 29, 2025
  • AresIndexer Public

    R package that creates the index and relevant files for an Ares deployment.

    OHDSI/AresIndexer’s past year of commit activity
    R 1 Apache-2.0 5 16 0 Updated Jan 29, 2025
  • PhenotypeR Public
    OHDSI/PhenotypeR’s past year of commit activity
    R 2 Apache-2.0 0 34 1 Updated Jan 29, 2025
  • WebAPI Public

    OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

    OHDSI/WebAPI’s past year of commit activity
    Java 134 Apache-2.0 168 131 (1 issue needs help) 24 Updated Jan 29, 2025
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 15 Apache-2.0 15 0 1 Updated Jan 29, 2025
  • OmopSketch Public
    OHDSI/OmopSketch’s past year of commit activity
    R 1 Apache-2.0 0 5 0 Updated Jan 29, 2025
  • FhirToCdm Public

    Conversion from FHIR HL7 to OMOP CDM

    OHDSI/FhirToCdm’s past year of commit activity
    C# 16 Apache-2.0 6 0 0 Updated Jan 29, 2025
  • OncologyWG Public

    Oncology Working Group Repository

    OHDSI/OncologyWG’s past year of commit activity
    Ruby 56 Apache-2.0 24 164 19 Updated Jan 28, 2025