fix: render other md log formats("gfm", "commonmark", "markua")

[Lovemore-Gakava]

Updates

• updated location of temporary files for md
• updated name of log to end in <filename>_log_<md type>.md
• used options for create_outputs format argument

Steps

library(whirl)
options(whirl.out_formats = c("html", "gfm", "commonmark", "markua"))
options::opt("out_formats", env = "whirl")
result <- run("inst/examples/simple/prg1.R")

Expected files output at the same location as code

Follow-up - potential tickets/issues

1. Do we want to track this files in the summary html? and/or
2. Do we need different formats for the summary?

[github-actions]

Github pages

Review the pkgdown webpage for the PR here

[github-actions]

Code coverage

Name	Coverage (%)
whirl	59.88
R/approvedpkgs.R	0.00
R/custom_logging.R	63.04
R/enrich_input.R	100.00
R/internal_run.R	100.00
R/mdformats.R	0.00
R/normalize_with_base.R	100.00
R/pb_script.R	43.75
R/quarto.R	95.24
R/read_regexp.R	93.33
R/render_summary.R	94.12
R/renv.R	0.00
R/run.R	100.00
R/session.R	79.86
R/status.R	91.30
R/strace.R	0.00
R/util_queue_summary.R	100.00
R/whirl_queue.R	94.12
R/whirl_r_session.R	82.11
R/zzz.R	0.00

[akselthomsen]

I just tried the branch - and it works good :)
For the two questions:

1. We don't track the html log today, so I don't think we need to add them
2. I am in doubt. In a way it would be nice, but not sure they will be useful. But should probably be controlled in the argument to run() anyway, and not through an option.

P.S. I just bumped the version.