Containerized CI and reusable workflow implementation #97
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: "Translate pyFV3 test (subset)" | |
| on: | |
| workflow_call: | |
| inputs: | |
| ndsl_hash: | |
| type: string | |
| default: '' | |
| required: true | |
| ndsl_trigger: | |
| type: boolean | |
| default: false | |
| required: true | |
| push: | |
| pull_request: | |
| types: [opened, synchronize, reopened, ready_for_review, labeled, unlabeled] | |
| # cancel running jobs if theres a newer push | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| all_tests: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: ghcr.io/noaa-gfdl/miniforge:mpich | |
| steps: | |
| - name: Checkout pyFV3 to test NDSL in pyFV3 | |
| if: ${{inputs.ndsl_trigger}} | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: 'recursive' | |
| repository: noaa-gfdl/pyFV3 | |
| path: pyFV3 | |
| - name: Checkout either pyFV3 (!workflow_call) or NDSL (workflow_call) | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: 'recursive' | |
| path: ${{github.event.repository.name}} | |
| - name: Checkout pyFV3 if part of NDSL workflow | |
| if: ${{inputs.ndsl_trigger}} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| mv NDSL pyFV3/NDSL | |
| - name: install packages to test NDSL in pyFV3 | |
| if: ${{inputs.ndsl_trigger}} | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| cd NDSL && pip3 install . && cd .. | |
| pip3 install .[test] | |
| - name: Install packages to test only pyFV3 | |
| if: ${{ ! inputs.ndsl_trigger }} | |
| run : | | |
| mv ${GITHUB_WORKSPACE}/${{github.event.repository.name}} ${GITHUB_WORKSPACE}/pyFV3 | |
| cd pyFV3 | |
| pip install .[ndsl,test] | |
| - name: Prepare test_data | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| mkdir -p test_data && cd test_data | |
| wget https://portal.nccs.nasa.gov/datashare/astg/smt/pace-regression-data/8.1.3_c12_6ranks_standard.tar.gz | |
| tar -xzvf 8.1.3_c12_6ranks_standard.tar.gz --no-same-owner | |
| cd .. | |
| - name: Numpy FvTp2d | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| pytest \ | |
| -v -s --data_path=./test_data/8.1.3/c12_6ranks_standard/dycore \ | |
| --backend=numpy \ | |
| --which_modules=FvTp2d \ | |
| --threshold_overrides_file=./tests/savepoint/translate/overrides/standard.yaml \ | |
| ./tests/savepoint | |
| - name: Numpy D_SW | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| pytest \ | |
| -v -s --data_path=./test_data/8.1.3/c12_6ranks_standard/dycore \ | |
| --backend=numpy \ | |
| --which_modules=D_SW \ | |
| --threshold_overrides_file=./tests/savepoint/translate/overrides/standard.yaml \ | |
| ./tests/savepoint | |
| - name: Numpy Remapping | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| pytest \ | |
| -v -s --data_path=./test_data/8.1.3/c12_6ranks_standard/dycore \ | |
| --backend=numpy \ | |
| --which_modules=Remapping \ | |
| --threshold_overrides_file=./tests/savepoint/translate/overrides/standard.yaml \ | |
| ./tests/savepoint | |
| - name: Orchestrated dace-cpu Acoustics | |
| run: | | |
| cd ${GITHUB_WORKSPACE}/pyFV3 | |
| export FV3_DACEMODE=BuildAndRun | |
| export PACE_FLOAT_PRECISION=64 | |
| export PACE_TEST_N_THRESHOLD_SAMPLES=0 | |
| export OMP_NUM_THREADS=1 | |
| export PACE_LOGLEVEL=Debug | |
| mpiexec -mca orte_abort_on_non_zero_status 1 -np 6 --oversubscribe pytest \ | |
| -v -s --data_path=./test_data/8.1.3/c12_6ranks_standard/dycore \ | |
| --backend=dace:cpu \ | |
| -m parallel \ | |
| --which_rank=0 \ | |
| --which_modules=DynCore \ | |
| --threshold_overrides_file=./tests/savepoint/translate/overrides/standard.yaml \ | |
| ./tests/savepoint |