Fixed spaces in README.

README

@@ -21,8 +21,7 @@ data parsing and formatting) on Ubuntu 17.10 Linux version 4.13.0-36 64-bit.
 
 The program can be run in two following modes of operation.
 
-1. In order to run the program on a single input elastic degenerate file and a single patterns file, set parameters inTextFile and inPatternFile (in params.hpp) to their paths, respectively (either absolute or relative paths to the root
-folder). Run without arguments as ./sopang in order to perform a run on these two files. In this mode, changing input files requires program recompilation.
+1. In order to run the program on a single input elastic degenerate file and a single patterns file, set parameters inTextFile and inPatternFile (in params.hpp) to their paths, respectively (either absolute or relative paths to the root folder). Run without arguments as ./sopang in order to perform a run on these two files. In this mode, changing input files requires program recompilation.
 
 2. The program can be also run with command line arguments for automated processing. Firstly, the parameter inDataFolder (in params.hpp) should be set to point to the folder containing the data -- changing this parameter requires recompilation, by default it points to the sample folder containing a single elastic-degenerate text and a single patterns file. Each input chromosome file name should be in the form chrN.eds, where N is the chromosome number, e.g., 1, 2, etc., and each input patterns file name should be in a form patternsM.txt, where M is the length of patterns in this file, e.g., 8, 16, etc. The program can be then run as follows:
 
@@ -57,8 +56,7 @@ outFile -- output file path,
 alphabet -- a set of symbols occurring in input text or patterns,
 dumpToFile -- set to true in order to dump file size information and throughput to output file (outFile),
 dumpIndexes -- set to true in order to dump all results, i.e., resulting indexes (end positions of segments where a match occurred) to standard output,
-nPatterns -- maximum number of patterns from the input pattern file
-(inPatternFile) which are processed, set to −1 to ignore.
+nPatterns -- maximum number of patterns from the input pattern file (inPatternFile) which are processed, set to -1 to ignore.
 
 sopang.hpp: