-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Build web application for deployment
- Loading branch information
GitHub Actions Bot
committed
Oct 31, 2023
1 parent
e8975f3
commit 27d05ea
Showing
513 changed files
with
36,406 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1 @@ | ||
www.shapeworks-cloud.org |
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
Large diffs are not rendered by default.
Oops, something went wrong.
Binary file not shown.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,173 @@ | ||
{ | ||
"id": "groom", | ||
"type": "object", | ||
"description": "Pre-process and prepare input data for the optimization process", | ||
"properties": { | ||
"section_1": { | ||
"title": "Mesh Grooming", | ||
"type": "object", | ||
"properties": { | ||
"fill_mesh_holes": { | ||
"type": "boolean", | ||
"default": true, | ||
"title": "Fill Holes", | ||
"x-display": "custom-conditional", | ||
"description": "Fill small holes in the mesh" | ||
}, | ||
"mesh_smooth": { | ||
"type": "boolean", | ||
"default": true, | ||
"title": "Smooth", | ||
"x-display": "custom-conditional", | ||
"description": "Enable mesh smoothing" | ||
}, | ||
"mesh_smoothing_method": { | ||
"type": "string", | ||
"enum": [ | ||
"Laplacian", | ||
"WindowedSinc" | ||
], | ||
"default": "Laplacian", | ||
"title": "Smoothing Method", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.mesh_smooth", | ||
"description": "Mesh smoothing type: Laplacian or Windowed Sinc" | ||
}, | ||
"mesh_smoothing_vtk_laplacian_iterations": { | ||
"type": "integer", | ||
"default": 10, | ||
"title": "Iterations", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.mesh_smoothing_method === 'Laplacian'", | ||
"x-cols": 6, | ||
"description": "Number of iterations of laplacian smoothing. More iterations provides more smoothing." | ||
}, | ||
"mesh_smoothing_vtk_laplacian_relaxation": { | ||
"type": "integer", | ||
"default": 1, | ||
"title": "Relaxation", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.mesh_smoothing_method === 'Laplacian'", | ||
"x-cols": 6, | ||
"description": "Relaxation controls the amount of smoothing in each iteration." | ||
}, | ||
"mesh_smoothing_vtk_windowed_sinc_iterations": { | ||
"type": "integer", | ||
"default": 10, | ||
"title": "Iterations", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.mesh_smoothing_method === 'WindowedSinc'", | ||
"x-cols": 6, | ||
"description": "Number of iterations of windowed sinc smoothing. More iterations provides more smoothing." | ||
}, | ||
"mesh_smoothing_vtk_windowed_sinc_passband": { | ||
"type": "number", | ||
"default": 0.05, | ||
"title": "Pass Band", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.mesh_smoothing_method === 'WindowedSinc'", | ||
"x-cols": 6, | ||
"description": "Passband parameter alters how much smoothing each iteration performs." | ||
}, | ||
"remesh": { | ||
"type": "boolean", | ||
"default": true, | ||
"title": "Remesh", | ||
"x-display": "custom-conditional", | ||
"x-cols": 6, | ||
"description": "Enable remeshing to create a more uniform adaptive mesh. Also fixes many mesh problems" | ||
}, | ||
"remesh_percent_mode": { | ||
"type": "boolean", | ||
"default": true, | ||
"title": "Use percentage", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.remesh", | ||
"x-cols": 6, | ||
"description": "Check this box to set the number of vertices based on a percentage of the mesh's current number of vertices" | ||
}, | ||
"remesh_percent": { | ||
"type": "number", | ||
"default": 75.0, | ||
"title": "Percentage of vertices", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.remesh && model.section_1.remesh_percent_mode", | ||
"description": "Set the target number of vertices as a percentage of the current number of vertices" | ||
}, | ||
"remesh_num_vertices": { | ||
"type": "integer", | ||
"default": 3000, | ||
"title": "Number of vertices", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.remesh && !model.section_1.remesh_percent_mode", | ||
"description": "Set the desired number of vertices directly" | ||
}, | ||
"remesh_gradation": { | ||
"type": "number", | ||
"default": 1, | ||
"title": "Adaptivity", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_1.remesh", | ||
"description": "Curvature adaptivity of remeshing (0 = uniform, 2.0 most adaptive). This allocates more triangles/vertices to areas of higher curvature" | ||
} | ||
} | ||
}, | ||
"section_2": { | ||
"title": "Alignment Options", | ||
"type": "object", | ||
"properties": { | ||
"reflect": { | ||
"type": "boolean", | ||
"default": false, | ||
"title": "Reflect", | ||
"description": "Option to reflect some shapes over a given axis if a given column matches a given value (e.g. reflect 'side' over 'Y' if 'left')" | ||
}, | ||
"reflect_column": { | ||
"type": "string", | ||
"enum": [ | ||
"shape_1", "groomed_1", "alignment_1", | ||
"procrustes_1", "local_particles_1", "world_particles_1" | ||
], | ||
"default": "shape_1", | ||
"x-cols": 6, | ||
"x-display": "custom-conditional", | ||
"x-display-if":"(model) => model.section_2.reflect", | ||
"description": "Choice of spreadsheet column to determine which subjects should be reflected" | ||
}, | ||
"reflect_axis": { | ||
"type": "string", | ||
"enum": [ | ||
"X", "Y", "Z" | ||
], | ||
"default": "X", | ||
"x-cols": 6, | ||
"x-display": "custom-conditional", | ||
"x-display-if":"(model) => model.section_2.reflect", | ||
"description": "Axis of reflection" | ||
}, | ||
"alignment_enabled": { | ||
"type": "boolean", | ||
"default": true, | ||
"title": "Alignment", | ||
"x-cols": 6, | ||
"description": "Enable/Disable alignment" | ||
}, | ||
"alignment_method": { | ||
"type": "string", | ||
"default": "Center", | ||
"title": "Align", | ||
"x-cols": 6, | ||
"enum": [ | ||
"Center", | ||
"Iterative Closest Point", | ||
"Landmark" | ||
], | ||
"x-class": "float-right pl-5", | ||
"x-display": "custom-conditional", | ||
"x-display-if": "(model) => model.section_2.alignment_enabled", | ||
"description": "Option to align with centering (center of mass), iterative closest point (translation and rotation), or landmarks (best fit, when specified)" | ||
} | ||
} | ||
} | ||
} | ||
} |
Oops, something went wrong.