Update Sanger_check.sh

MaestSi · Dec 18, 2019 · 5681c71 · 5681c71
1 parent 1247e4d
commit 5681c71
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/Sanger_check.sh b/Sanger_check.sh
@@ -21,7 +21,7 @@
 CONTIGS_DIR=$1
 SANGER_DIR=$2
 
-BLASTN=/path/to/blastn
+BLASTN=blastn #specify full path if you want to use a version of the program which is not in your PATH
 
 contigs_files=$(find $CONTIGS_DIR -maxdepth 1 | grep "\\.contigs\\.fasta")
 sanger_files=$(find $SANGER_DIR -maxdepth 1 | grep "reference.*\\.fasta")