v1.5.0

A lot of new features to streamline the user experience, and cleaning up some bugs along the way. The main new features are:

• import SLEAP projects into the app
• export Lightning Pose projects from the app
• check (and download) manual annotations
• update ensemble kalman smoother to the jax-based v2.0

We also updated a lot of the dependency versions; see the instructions here for how to properly update your app environment.

More details

• Unzziped_frames_V2 by @Shmuel-columbia in #83
• unit test bug fix by @themattinthehatt in #84
• Import sleap proj by @Shmuel-columbia in #85
• delete project by @themattinthehatt in #86
• streamline label studio checks for large datasets by @themattinthehatt in #87
• add export project option by @Shmuel-columbia in #88
• Add Check labels feature by @Shmuel-columbia in #89
• unit tests and bugs by @Shmuel-columbia in #91
• delete zip/slp files on project import by @themattinthehatt in #92
• update to jax-based eks by @themattinthehatt in #93
• pre release changes by @Shmuel-columbia in #94
• Post update fixes by @Shmuel-columbia in #95
• Bugs fixing by @Shmuel-columbia in #97

Full Changelog: v1.4.1...v1.5.0

v1.4.1

What's Changed

• preworkshop_edits by @Shmuel-columbia in #79
  • simplify tab names
  • select existing videos in frame extraction tab
  • add timers for "training complete"/"extraction complete" messages
• only allow training or inference when tab is idle
• update LP version
• update label studio xml with more hotkeys
• update docs

Full Changelog: v1.4.0...v1.4.1

v1.4.0

What's Changed

• ensembling + eks by @themattinthehatt in #74
  • multi-seed training
  • refactor status dicts for training and inference
  • run inference on ensemble
  • implement EKS
  • dummy proof some user inputs in train/infer and project tabs
• add scripts/docs for running inference from command line by @themattinthehatt in #78

Full Changelog: v1.3.0...v1.4.0

v1.3.0

What's Changed

• uploading projects bugs fixing by @Shmuel-columbia in #65
• expose rng seed selection in training tab by @Shmuel-columbia in #66
• add eks tab to infer by @Shmuel-columbia in #67
• [fix] allow zipped files of frames to contain intermediate directories by @themattinthehatt in #68
• documentation by @themattinthehatt in #69
• backend refactoring by @themattinthehatt in #70
• v1.3.0 updates by @themattinthehatt in #72
  • import mirror-mouse-example dataset directly into the app/labelstudio; remove demo_app.py (and labeling_app.py)
  • do not require re-uploading of videos during inference
  • update LP version
  • update docs
  • produce a useful progress bar during labeled video creation
  • fix active learning test that occasionally broke due to unset random seed

Full Changelog: v1.2.0...v1.3.0

v1.2.0

What's Changed

• video reader by @Shmuel-columbia in #55
• Better image resize/batch size defaults by @themattinthehatt in #60
• more labeled video options during inference by @themattinthehatt in #61
• Active learning new by @Shmuel-columbia in #57
• improved defaults updates by @themattinthehatt in #62
• [fix] active learning bug by @themattinthehatt in #63
• [docs] active learning + video player by @themattinthehatt in #64

Full Changelog: v1.1.0...v1.2.0

v1.1.0

• remove FileSystem backend
• zipped frame uploads
• unit tests
• streamline fiftyone dataset creation
• update lightning-pose version
• minor bug fixes and documentation updates

v1.0.0

Lightning Pose App version 1.0.0 🎉

First official release of the Lightning Pose App!

Thanks to everyone involved in this huge effort:

• @robert-s-lee
• @danbider
• @tchaton
• @awaelchli
• @williamFalcon
• @Borda
• @themattinthehatt