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Update Cohort Ontology to add Location Properties
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@vakharia-aarya
vakharia-aarya committed Jun 12, 2024
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Showing 1 changed file with 59 additions and 23 deletions.
82 changes: 59 additions & 23 deletions development/CohortOntology.owl
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<terms:contributor>MiHyun Jang</terms:contributor>
<terms:contributor>Michael Bornstein</terms:contributor>
<terms:contributor>Ryan Espiritu</terms:contributor>
<terms:contributor>Aarya Vakharia</terms:contributor>
<terms:creator>Daniel Garijo</terms:creator>
<terms:creator>Haripriya Dharmala</terms:creator>
<terms:creator>Hernan Vargas</terms:creator>
<terms:creator>Joanna Bright</terms:creator>
<terms:creator>Josh Boyd</terms:creator>
<terms:creator>Neda Jahanshad</terms:creator>
<terms:creator>Wesley Surento</terms:creator>
<terms:creator>Yolanda Gil</terms:creator>
<terms:creator>Hernan Vargas</terms:creator>
<terms:description xml:lang="en">An ontology to describe cohorts of patients participating in ENIGMA projects.</terms:description>
<terms:license rdf:resource="http://creativecommons.org/licenses/by/2.0/"/>
<terms:title xml:lang="en">The Cohort Ontology</terms:title>
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<!-- https://w3id.org/enigma#has_location -->

<owl:ObjectProperty rdf:about="https://w3id.org/enigma#has_location">
<rdfs:domain rdf:resource="https://w3id.org/enigma#Cohort"/>
<rdfs:range rdf:resource="https://w3id.org/enigma#Location"/>
<rdfs:comment>The location of the cohort</rdfs:comment>
<rdfs:label>has location</rdfs:label>
</owl:ObjectProperty>



<!-- https://w3id.org/enigma#isPartOfCohort -->

<owl:ObjectProperty rdf:about="https://w3id.org/enigma#isPartOfCohort">
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<rdfs:comment xml:lang="en">Describes the ancestry of the participants of the cohort</rdfs:comment>
<rdfs:label xml:lang="en">has ancestry</rdfs:label>
</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#hasBriefDescription -->
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</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#hasExclusionCriteria -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#hasExclusionCriteria">
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<!-- https://w3id.org/enigma#has_city -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#has_city">
<rdfs:domain rdf:resource="https://w3id.org/enigma#Location"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
<rdfs:comment>City in which cohort is located</rdfs:comment>
<rdfs:label>has city</rdfs:label>
</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#has_country -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#has_country">
<rdfs:domain rdf:resource="https://w3id.org/enigma#Location"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
<rdfs:comment>Country in which cohort is located</rdfs:comment>
<rdfs:label>has country</rdfs:label>
</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#has_latitude -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#has_latitude">
<rdfs:domain rdf:resource="https://w3id.org/enigma#Location"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#float"/>
<rdfs:comment>The latitude of the cohort</rdfs:comment>
<rdfs:label>has latitude</rdfs:label>
</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#has_longitude -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#has_longitude">
<rdfs:domain rdf:resource="https://w3id.org/enigma#Location"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#float"/>
<rdfs:comment>The longitude of the cohort</rdfs:comment>
<rdfs:label>has longitude</rdfs:label>
</owl:DatatypeProperty>



<!-- https://w3id.org/enigma#isOverallCohort -->

<owl:DatatypeProperty rdf:about="https://w3id.org/enigma#isOverallCohort">
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<!-- https://w3id.org/enigma#City -->

<owl:Class rdf:about="https://w3id.org/enigma#City">
<rdfs:subClassOf rdf:resource="https://w3id.org/enigma#Location"/>
<vann:example xml:lang="en">Los Angeles</vann:example>
<rdfs:comment xml:lang="en">City in which a cohort is located</rdfs:comment>
<rdfs:label xml:lang="en">City</rdfs:label>
</owl:Class>



<!-- https://w3id.org/enigma#Cohort -->

<owl:Class rdf:about="https://w3id.org/enigma#Cohort">
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<!-- https://w3id.org/enigma#Country -->

<owl:Class rdf:about="https://w3id.org/enigma#Country">
<rdfs:subClassOf rdf:resource="https://w3id.org/enigma#Location"/>
<vann:example xml:lang="en">United States</vann:example>
<rdfs:comment xml:lang="en">Country in which a cohort is located</rdfs:comment>
<rdfs:label xml:lang="en">Country</rdfs:label>
</owl:Class>



<!-- https://w3id.org/enigma#Covariates -->

<owl:Class rdf:about="https://w3id.org/enigma#Covariates">
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