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Update README.md
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update citation for SPAdes
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JianjunJin authored Jan 27, 2024
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Expand Up @@ -25,7 +25,7 @@ Please denote the version of GetOrganelle as well as the dependencies in your ma

Please also cite the dependencies if used:

SPAdes: [Bankevich, A., S. Nurk, D. Antipov, A. A. Gurevich, M. Dvorkin, A. S. Kulikov, V. M. Lesin, S. I. Nikolenko, S. Pham, A. D. Prjibelski, A. V. Pyshkin, A. V. Sirotkin, N. Vyahhi, G. Tesler, M. A. Alekseyev and P. A. Pevzner. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. Journal of Computational Biology 19: 455-477.](https://www.liebertpub.com/doi/abs/10.1089/cmb.2012.0021)
SPAdes: [Prjibelski, A., Antipov, D., Meleshko, D., Lapidus, A. and Korobeynikov, A. 2020. Using SPAdes de novo assembler. Current protocols in bioinformatics, 70(1), p.e102.](https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.102)

Bowtie2: [Langmead, B. and S. L. Salzberg. 2012. Fast gapped-read alignment with Bowtie 2. Nature Methods 9: 357-359.](https://www.nature.com/articles/nmeth.1923)

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