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liux4283 authored Jan 14, 2024
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6 changes: 3 additions & 3 deletions README.Rmd
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Expand Up @@ -14,7 +14,7 @@ knitr::opts_chunk$set(
options(tibble.print_min = 5, tibble.print_max = 5)
```

# SmCCNet: A Comprehensive Tool for Multi-Omics Network Inference <a href="https://liux4283.github.io/SmCCNet"><img src="vignettes/figures/logo.png" align="right" height="138" /></a>
# SmCCNet: A Comprehensive Tool for Multi-Omics Network Inference <a href="https://liux4283.github.io/SmCCNet"><img src="vignettes/figures/logo.jpg" align="right" height="138" /></a>

<!-- badges: start -->
[![CRAN status](https://www.r-pkg.org/badges/version/SmCCNet)](https://cran.r-project.org/web/packages/SmCCNet/index.html)
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```{r,echo = FALSE,out.width='90%'}
knitr::include_graphics("vignettes/figures/smccnetworkflow.png")
knitr::include_graphics("vignettes/figures/smccnetworkflow.jpg")
```


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## SmCCNet Example Output Product

```{r,echo = FALSE,out.width='100%'}
knitr::include_graphics("vignettes/figures/example_network_continuous.png")
knitr::include_graphics("vignettes/figures/example_network_continuous.jpg")
```

# Package Functions
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6 changes: 3 additions & 3 deletions README.md
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@@ -1,7 +1,7 @@

<!-- README.md is generated from README.Rmd. Please edit that file -->

# SmCCNet: A Comprehensive Tool for Multi-Omics Network Inference <a href="https://liux4283.github.io/SmCCNet"><img src="vignettes/figures/logo.png" align="right" height="138" /></a>
# SmCCNet: A Comprehensive Tool for Multi-Omics Network Inference <a href="https://liux4283.github.io/SmCCNet"><img src="vignettes/figures/logo.jpg" align="right" height="138" /></a>

<!-- badges: start -->

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## General Workflow

<img src="vignettes/figures/smccnetworkflow.png" width="90%" />
<img src="vignettes/figures/smccnetworkflow.jpg" width="90%" />

## Multi-Omics SmCCNet with Quantitative Phenotype

Expand All @@ -111,7 +111,7 @@ The final network generated from SmCCNet can be visualized in two ways:

## SmCCNet Example Output Product

<img src="vignettes/figures/example_network_continuous.png" width="100%" />
<img src="vignettes/figures/example_network_continuous.jpg" width="100%" />

# Package Functions

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