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@Katsevich-Lab

Katsevich-Lab

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  1. lab-resources lab-resources Public

    TeX

  2. sceptre sceptre Public

    An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.

    R 26 8

  3. sceptre-manuscript sceptre-manuscript Public

    This repository contains code for the paper "Conditional resampling improves calibration and sensitivity in single cell CRISPR screen analysis" by Barry et al. 2020.

    TeX 3

Repositories

Showing 10 of 36 repositories
  • katsevich-lab.github.io Public Forked from mpa139/allanlab

    Katsevich Lab website

    Katsevich-Lab/katsevich-lab.github.io’s past year of commit activity
    SCSS 0 1,203 0 0 Updated Jan 9, 2025
  • sceptre Public

    An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.

    Katsevich-Lab/sceptre’s past year of commit activity
    R 26 GPL-3.0 8 19 2 Updated Dec 30, 2024
  • simulatr-pipeline Public Forked from timothy-barry/simulatr-pipeline

    The simulatr Nextflow pipeline

    Katsevich-Lab/simulatr-pipeline’s past year of commit activity
    R 0 3 2 0 Updated Nov 24, 2024
  • import-peisker-2022 Public
    Katsevich-Lab/import-peisker-2022’s past year of commit activity
    R 0 0 0 0 Updated Oct 22, 2024
  • lab-resources Public
    Katsevich-Lab/lab-resources’s past year of commit activity
    TeX 0 0 1 0 Updated Oct 19, 2024
  • symcrt2-manuscript Public
    Katsevich-Lab/symcrt2-manuscript’s past year of commit activity
    TeX 0 0 0 0 Updated Sep 14, 2024
  • spacrt-manuscript Public
    Katsevich-Lab/spacrt-manuscript’s past year of commit activity
    TeX 0 0 0 0 Updated Aug 26, 2024
  • katlabutils Public
    Katsevich-Lab/katlabutils’s past year of commit activity
    R 0 1 0 0 Updated Aug 4, 2024
  • import-morris-2023 Public

    Code to import the Morris 2023 dataset.

    Katsevich-Lab/import-morris-2023’s past year of commit activity
    0 0 0 0 Updated Jun 28, 2024
  • sceptrehub Public

    `sceptrehub` provides an interface to the example data used in the vignettes and man pages of the `sceptre` and `ondisc` packages. It also facilitates the download of `sceptre_objects` associated with real, large-scale single-cell CRISPR screen datasets.

    Katsevich-Lab/sceptrehub’s past year of commit activity
    R 0 0 0 0 Updated May 20, 2024
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