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OasisMove CI

OasisMove CI #352

name: CI
on:
push:
# The CI is executed on every push on every branch
branches:
- main
pull_request:
# The CI is executed on every pull request to the main branch
branches:
- main
schedule:
# The CI is executed every day at 8am
- cron: "0 8 * * *"
env:
CACHE_NUMBER: 3 # Increase to reset cache
jobs:
check-code:
name: Check code
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Upgrade pip and setuptools
run: python3 -m pip install pip setuptools --upgrade
- name: Install OasisMove
run: python3 -m pip install .[test]
- name: Check code with Flake8
run: python3 -m flake8
test-code:
needs: check-code
strategy:
matrix:
include:
- os: ubuntu-latest
label: linux-64
prefix: /usr/share/miniconda3/envs/oasismove
- os: macos-latest
label: osx-64
prefix: /Users/runner/miniconda3/envs/oasismove
name: Test OasisMove on ${{ matrix.label }}
runs-on: ${{ matrix.os }}
# https://github.com/marketplace/actions/setup-miniconda#use-a-default-shell
defaults:
run:
shell: bash -l {0}
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Upgrade pip and setuptools
run: |
python3 -m pip install pip setuptools --upgrade
# See: https://github.com/marketplace/actions/setup-miniconda
- name: Setup Mambaforge
uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
channels: conda-forge
activate-environment: oasismove
use-mamba: true
- name: Set cache date
run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV
- uses: actions/cache@v2
with:
path: ${{ matrix.prefix }}
key: ${{ matrix.label }}-conda-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }}
id: cache
- name: Update environment
run: mamba env update -n oasismove -f environment.yml
if: steps.cache.outputs.cache-hit != 'true'
- name: Install OasisMove
run: python3 -m pip install .[test]
- name: Run tests
run: python3 -m pytest tests
- name: Upload coverage report to codecov
if: matrix.os == 'ubuntu-latest'
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ./coverage.xml
fail_ci_if_error: false
verbose: true