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@Julie-Fabre Julie-Fabre released this 19 Nov 20:24
· 61 commits to main since this release
v1.7.0
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Learn about vigilant mode.

A bunch of things because I haven't done a release in a while:

New features:

  • support for post-hoc splitting/merging in phy - bombcell can now run on those new outputs. This introduced a breaking change - the loadEphys function now needs an additional input to work properly - see the gettingStarted.mlx script
  • option to fit spatial decay with an exponential function - this is now the default, it performs much better
  • better non-somatic metrics: we now have two ratios, the initial peak to repolarization peak ratio and the main peak to trough ratio
  • introduces a new noise metric: the repolarization peak to trough ratio
  • another (slightly better but slower) option to compute refractory period violations: Llobet et al. set param.hillOrLlobetMethod to 0 / false to enable.

Visualization update:

  • updated GUI to be in two parts, with dynamic histograms that show where the current unit falls in the distribution. Helpful to adjust and fine-tune parameters

Fixes:

  • only compute spatial decay of geometry of probe allows (ie if it is a high density probe)
  • more robust waveform peak and trough detection
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