Merge pull request #30 from Inria-Empenn/hugoblox-import-publications

Hugo Blox Builder - Import latest publications

content/publication/bak-coleman-replication-2022/cite.bib

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+@misc{bak-coleman_replication_2022,
+ abstract = {Efforts to replicate portions of the scientific literature have lead to widely varying and often low rates of replicability. This has raised concerns over a ``replication crisis'' whereby many of the statistically significant claims in the published literature are thought to be false positives, due to some combination of publication bias and widespread use of questionable research practices. Here, we re-analyze data from large-scale replication efforts and show that few, if any, replication failures can be attributed to false positives. We then present a minimal, alternative model of how replication failures can occur even in the absence of false positives. Using our model, we show that variation in estimates of replicability across social science appears largely to be an artifact of replication sample size. Our results further suggest that file-drawer sizes are likely much smaller, and Questionable Research Practices less abundant, than commonly assumed.  We anticipate our findings will be a starting point for more formal and nuanced discussion of the health of the scientific literature and areas for improvement.},
+ author = {Bak-Coleman, Joseph B and Mann, Richard P. and Bergstrom, Carl T. and Gross, Kevin and West, Jevin},
+ copyright = {https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode},
+ doi = {10.31235/osf.io/rkyf7},
+ file = {Bak-Coleman et al. - 2022 - The replication crisis is not a crisis of false po.pdf:/home/alpron/Zotero/storage/CRNLNR9E/Bak-Coleman et al. - 2022 - The replication crisis is not a crisis of false po.pdf:application/pdf},
+ keywords = {best practices, to read},
+ month = {April},
+ title = {The replication crisis is not a crisis of false positives},
+ url = {https://osf.io/rkyf7},
+ urldate = {2024-09-24},
+ year = {2022}
+}

content/publication/bak-coleman-replication-2022/index.md

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+---
+title: The replication crisis is not a crisis of false positives
+authors:
+- Joseph B Bak-Coleman
+- Richard P. Mann
+- Carl T. Bergstrom
+- Kevin Gross
+- Jevin West
+date: '2022-04-01'
+publishDate: '2024-09-24T12:27:55.094877Z'
+publication_types:
+- manuscript
+doi: 10.31235/osf.io/rkyf7
+abstract: Efforts to replicate portions of the scientific literature have lead to
+  widely varying and often low rates of replicability. This has raised concerns over
+  a ``replication crisis'' whereby many of the statistically significant claims in
+  the published literature are thought to be false positives, due to some combination
+  of publication bias and widespread use of questionable research practices. Here,
+  we re-analyze data from large-scale replication efforts and show that few, if any,
+  replication failures can be attributed to false positives. We then present a minimal,
+  alternative model of how replication failures can occur even in the absence of false
+  positives. Using our model, we show that variation in estimates of replicability
+  across social science appears largely to be an artifact of replication sample size.
+  Our results further suggest that file-drawer sizes are likely much smaller, and
+  Questionable Research Practices less abundant, than commonly assumed.  We anticipate
+  our findings will be a starting point for more formal and nuanced discussion of
+  the health of the scientific literature and areas for improvement.
+tags:
+- best practices
+- to read
+links:
+- name: URL
+  url: https://osf.io/rkyf7
+---

content/publication/germani-predire-nodate/cite.bib

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+@article{germani_predire_nodate,
+ author = {Germani, Elodie and Baghwat, Nikhil and Dugré, Mathieu and Gau, Remi and Sokolowski, Andrzej and Fromont, Elisa and Maumet, Camille and Sharp, Madeleine and Poline, Jean-Baptiste and Glatard, Tristan},
+ file = {Germani et al. - Prédire l'évolution de la maladie de Parkinson à l.pdf:/home/alpron/Zotero/storage/XSJHIUX6/Germani et al. - Prédire l'évolution de la maladie de Parkinson à l.pdf:application/pdf},
+ language = {fr},
+ title = {Prédire l'évolution de la maladie de Parkinson à l'aide de données cliniques et d'IRM fonctionnelles: reproduction et robustesse d'une étude}
+}

content/publication/germani-predire-nodate/index.md

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+---
+title: "Prédire l'évolution de la maladie de Parkinson à l'aide de données cliniques
+  et d'IRM fonctionnelles: reproduction et robustesse d'une étude"
+authors:
+- Elodie Germani
+- Nikhil Baghwat
+- Mathieu Dugré
+- Remi Gau
+- Andrzej Sokolowski
+- Elisa Fromont
+- Camille Maumet
+- Madeleine Sharp
+- Jean-Baptiste Poline
+- Tristan Glatard
+date: -01-01
+publishDate: '2024-09-24T12:27:55.078248Z'
+publication_types:
+- article-journal
+---

content/publication/horien-hitchhikers-2020/cite.bib

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+@article{horien_hitchhikers_2020,
+ author = {Horien, Corey and Noble, Stephanie and Greene, Abigail S. and Lee, Kangjoo and Barron, Daniel S. and Gao, Siyuan and O’Connor, David and Salehi, Mehraveh and Dadashkarimi, Javid and Shen, Xilin and Lake, Evelyn M. R. and Constable, R. Todd and Scheinost, Dustin},
+ doi = {10.1038/s41562-020-01005-4},
+ file = {Horien et al. - 2020 - A hitchhiker’s guide to working with large, open-s.pdf:/home/alpron/Zotero/storage/RS2FQACP/Horien et al. - 2020 - A hitchhiker’s guide to working with large, open-s.pdf:application/pdf},
+ issn = {2397-3374},
+ journal = {Nature Human Behaviour},
+ keywords = {Review, to read},
+ language = {en},
+ month = {December},
+ number = {2},
+ pages = {185--193},
+ title = {A hitchhiker’s guide to working with large, open-source neuroimaging datasets},
+ url = {https://www.nature.com/articles/s41562-020-01005-4},
+ urldate = {2024-08-26},
+ volume = {5},
+ year = {2020}
+}

content/publication/horien-hitchhikers-2020/index.md

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+---
+title: A hitchhiker’s guide to working with large, open-source neuroimaging datasets
+authors:
+- Corey Horien
+- Stephanie Noble
+- Abigail S. Greene
+- Kangjoo Lee
+- Daniel S. Barron
+- Siyuan Gao
+- David O’Connor
+- Mehraveh Salehi
+- Javid Dadashkarimi
+- Xilin Shen
+- Evelyn M. R. Lake
+- R. Todd Constable
+- Dustin Scheinost
+date: '2020-12-01'
+publishDate: '2024-09-24T12:27:55.087636Z'
+publication_types:
+- article-journal
+publication: '*Nature Human Behaviour*'
+doi: 10.1038/s41562-020-01005-4
+tags:
+- Review
+- to read
+links:
+- name: URL
+  url: https://www.nature.com/articles/s41562-020-01005-4
+---

content/publication/van-kampen-encore-2024/cite.bib

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+@article{van_kampen_encore_2024,
+ author = {Van Kampen, Antoine H. C. and Mahamune, Utkarsh and Jongejan, Aldo and Van Schaik, Barbera D. C. and Balashova, Daria and Lashgari, Danial and Pras-Raves, Mia and Wever, Eric J. M. and Dane, Adrie D. and García-Valiente, Rodrigo and Moerland, Perry D.},
+ doi = {10.1038/s41467-024-52446-8},
+ file = {Van Kampen et al. - 2024 - ENCORE a practical implementation to improve repr.pdf:/home/alpron/Zotero/storage/38V6GQNY/Van Kampen et al. - 2024 - ENCORE a practical implementation to improve repr.pdf:application/pdf},
+ issn = {2041-1723},
+ journal = {Nature Communications},
+ keywords = {to read},
+ language = {en},
+ month = {September},
+ number = {1},
+ pages = {8117},
+ shorttitle = {ENCORE},
+ title = {ENCORE: a practical implementation to improve reproducibility and transparency of computational research},
+ url = {https://www.nature.com/articles/s41467-024-52446-8},
+ urldate = {2024-09-24},
+ volume = {15},
+ year = {2024}
+}

content/publication/van-kampen-encore-2024/index.md

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+---
+title: 'ENCORE: a practical implementation to improve reproducibility and transparency
+  of computational research'
+authors:
+- Antoine H. C. Van Kampen
+- Utkarsh Mahamune
+- Aldo Jongejan
+- Barbera D. C. Van Schaik
+- Daria Balashova
+- Danial Lashgari
+- Mia Pras-Raves
+- Eric J. M. Wever
+- Adrie D. Dane
+- Rodrigo García-Valiente
+- Perry D. Moerland
+date: '2024-09-01'
+publishDate: '2024-09-24T12:27:55.102136Z'
+publication_types:
+- article-journal
+publication: '*Nature Communications*'
+doi: 10.1038/s41467-024-52446-8
+tags:
+- to read
+links:
+- name: URL
+  url: https://www.nature.com/articles/s41467-024-52446-8
+---