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Upgrade to NamedGraphs v0.5, Datagraphs v0.2 (#159)
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@mtfishman
mtfishman authored Apr 24, 2024
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8 changes: 4 additions & 4 deletions Project.toml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "ITensorNetworks"
uuid = "2919e153-833c-4bdc-8836-1ea460a35fc7"
authors = ["Matthew Fishman <[email protected]> and contributors"]
version = "0.8.2"
version = "0.9.0"

[deps]
AbstractTrees = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
Expand Down Expand Up @@ -46,19 +46,19 @@ ITensorNetworksEinExprsExt = "EinExprs"
AbstractTrees = "0.4.4"
Combinatorics = "1"
Compat = "3, 4"
DataGraphs = "0.1.13"
DataGraphs = "0.2.2"
DataStructures = "0.18"
Dictionaries = "0.4"
Distributions = "0.25.86"
DocStringExtensions = "0.8, 0.9"
EinExprs = "0.6.4"
Graphs = "1.8"
GraphsFlows = "0.1.1"
ITensors = "0.3.58"
ITensors = "0.3.58, 0.4"
IsApprox = "0.1"
IterTools = "1.4.0"
KrylovKit = "0.6, 0.7"
NamedGraphs = "0.1.23"
NamedGraphs = "0.5.1"
NDTensors = "0.2, 0.3"
Observers = "0.2"
PackageExtensionCompat = "1"
Expand Down
62 changes: 32 additions & 30 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -32,15 +32,13 @@ julia> ] add ITensorNetworks
Here are is an example of making a tensor network on a chain graph (a tensor train or matrix product state):

```julia
julia> using Graphs: neighbors
julia> using Graphs: neighbors, path_graph

julia> using ITensorNetworks: ITensorNetwork, siteinds
julia> using ITensorNetworks: ITensorNetwork

julia> using NamedGraphs: named_grid, subgraph

julia> tn = ITensorNetwork(named_grid(4); link_space=2)
julia> tn = ITensorNetwork(path_graph(4); link_space=2)
ITensorNetworks.ITensorNetwork{Int64} with 4 vertices:
4-element Vector{Int64}:
4-element Dictionaries.Indices{Int64}
1
2
3
Expand Down Expand Up @@ -89,9 +87,13 @@ julia> neighbors(tn, 4)
and here is a similar example for making a tensor network on a grid (a tensor product state or project entangled pair state (PEPS)):

```julia
julia> using NamedGraphs.GraphsExtensions: subgraph

julia> using NamedGraphs.NamedGraphGenerators: named_grid

julia> tn = ITensorNetwork(named_grid((2, 2)); link_space=2)
ITensorNetworks.ITensorNetwork{Tuple{Int64, Int64}} with 4 vertices:
4-element Vector{Tuple{Int64, Int64}}:
4-element Dictionaries.Indices{Tuple{Int64, Int64}}
(1, 1)
(2, 1)
(1, 2)
Expand Down Expand Up @@ -126,7 +128,7 @@ julia> neighbors(tn, (1, 2))

julia> tn_1 = subgraph(v -> v[1] == 1, tn)
ITensorNetworks.ITensorNetwork{Tuple{Int64, Int64}} with 2 vertices:
2-element Vector{Tuple{Int64, Int64}}:
2-element Dictionaries.Indices{Tuple{Int64, Int64}}
(1, 1)
(1, 2)

Expand All @@ -140,7 +142,7 @@ with vertex data:

julia> tn_2 = subgraph(v -> v[1] == 2, tn)
ITensorNetworks.ITensorNetwork{Tuple{Int64, Int64}} with 2 vertices:
2-element Vector{Tuple{Int64, Int64}}:
2-element Dictionaries.Indices{Tuple{Int64, Int64}}
(2, 1)
(2, 2)

Expand All @@ -159,13 +161,13 @@ Networks can also be merged/unioned:
```julia
julia> using ITensors: prime

julia> using ITensorNetworks: ⊗, contract, contraction_sequence
julia> using ITensorNetworks: ⊗, contract, contraction_sequence, siteinds

julia> using ITensorUnicodePlots: @visualize

julia> s = siteinds("S=1/2", named_grid(3))
ITensorNetworks.IndsNetwork{Int64, ITensors.Index} with 3 vertices:
3-element Vector{Int64}:
3-element Dictionaries.Indices{Int64}
1
2
3
Expand All @@ -185,7 +187,7 @@ and edge data:

julia> tn1 = ITensorNetwork(s; link_space=2)
ITensorNetworks.ITensorNetwork{Int64} with 3 vertices:
3-element Vector{Int64}:
3-element Dictionaries.Indices{Int64}
1
2
3
Expand All @@ -202,7 +204,7 @@ with vertex data:
julia> tn2 = ITensorNetwork(s; link_space=2)
ITensorNetworks.ITensorNetwork{Int64} with 3 vertices:
3-element Vector{Int64}:
3-element Dictionaries.Indices{Int64}
1
2
3
Expand Down Expand Up @@ -293,8 +295,8 @@ julia> @visualize Z;

julia> contraction_sequence(Z)
2-element Vector{Vector}:
NamedGraphs.Key{Tuple{Int64, Int64}}[Key((1, 1)), Key((1, 2))]
Any[Key((2, 1)), Any[Key((2, 2)), NamedGraphs.Key{Tuple{Int64, Int64}}[Key((3, 1)), Key((3, 2))]]]
NamedGraphs.Keys.Key{Tuple{Int64, Int64}}[Key((1, 1)), Key((1, 2))]
Any[Key((2, 1)), Any[Key((2, 2)), NamedGraphs.Keys.Key{Tuple{Int64, Int64}}[Key((3, 1)), Key((3, 2))]]]

julia> Z̃ = contract(Z, (1, 1) => (2, 1));

Expand All @@ -303,20 +305,20 @@ julia> @visualize Z̃;
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀Z̃(2, 1)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀(2)'⠤⠤⠔⠒⠒⠉⠉⠀⠀⢱⠀⠈⠉⠑⠒⠢⠤⢄⣀2⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⣀⣀⠤⠤⠔⠒⠊⠉⠉⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠈⡆⠀⠀⠀⠀⠀⠀⠀⠀⠀⠉⠉⠒⠒⠤⠤⢄⣀⡀⠀⠀⠀⠀⠀
⠀Z̃(3, 1)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢱⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀Z̃(1, 2)⠀⠀
⠀⠀⠀⠀⠀⢸⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠈⡆⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⡇⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀2⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⣀⠔⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⢸⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⡇⠀⠀⠀⠀⠀⠀⠀⡠2⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⡇⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢸⠀⠀⠀⠀⠀⡠⠊⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀2⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⡇⠀⢀⠤⠊⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⢇⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀Z̃(2, 2)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠸⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⣀⡠⠤⠒⠊⠉⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⢇⠀⠀⠀⠀⠀⠀⠀⠀⢀⣀⠤2⠒⠉⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠸⡀⠀⣀⡠⠤⠒⠊⠉⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀Z̃(3, 2)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀Z̃(3, 1)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠉⠉⠑⠒⠒⠢⠤⠤⣀⣀⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠈2⠉⠑⠒⠒⠤⠤⠤⣀⣀⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀(2)'⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀Z̃(3, 2)⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠤⠊⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⡠⠒⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⢀⠔⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀2⠊⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀Z̃(2, 1)⠤⠤⣀⣀⣀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⡠⠊⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⢣⠀⠀⠀⠀⠀⠀⠀⠀⠉⠉⠑⠒2⠢⠤⠤⣀⣀⡀⠀⠀⠀⠀⠀⠀⠀⣀⠔⠉⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⢸⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠈⠉Z̃(2, 2)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀2⡄⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⣀⠤⠤⠒⠊⠉⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⡇⠀⠀⠀⠀⠀⠀⠀⠀⣀⡠⠤2⠒⠉⠁⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⢱⠀⢀⣀⠤⠔⠒⠊⠉⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀Z̃(1, 2)⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀
Expand All @@ -328,7 +330,7 @@ julia> @visualize Z̃;
This file was generated with [weave.jl](https://github.com/JunoLab/Weave.jl) with the following commands:
This file was generated with [Weave.jl](https://github.com/JunoLab/Weave.jl) with the following commands:
```julia
using ITensorNetworks: ITensorNetworks
Expand Down
13 changes: 7 additions & 6 deletions examples/README.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -32,10 +32,9 @@ Random.seed!(ITensors.index_id_rng(), 1234);
#' Here are is an example of making a tensor network on a chain graph (a tensor train or matrix product state):
#+ term=true

using Graphs: neighbors
using ITensorNetworks: ITensorNetwork, siteinds
using NamedGraphs: named_grid, subgraph
tn = ITensorNetwork(named_grid(4); link_space=2)
using Graphs: neighbors, path_graph
using ITensorNetworks: ITensorNetwork
tn = ITensorNetwork(path_graph(4); link_space=2)
tn[1]
tn[2]
neighbors(tn, 1)
Expand All @@ -46,6 +45,8 @@ neighbors(tn, 4)
#' and here is a similar example for making a tensor network on a grid (a tensor product state or project entangled pair state (PEPS)):
#+ term=true

using NamedGraphs.GraphsExtensions: subgraph
using NamedGraphs.NamedGraphGenerators: named_grid
tn = ITensorNetwork(named_grid((2, 2)); link_space=2)
tn[1, 1]
neighbors(tn, (1, 1))
Expand All @@ -57,7 +58,7 @@ tn_2 = subgraph(v -> v[1] == 2, tn)
#+ term=true

using ITensors: prime
using ITensorNetworks: ⊗, contract, contraction_sequence
using ITensorNetworks: ⊗, contract, contraction_sequence, siteinds
using ITensorUnicodePlots: @visualize
s = siteinds("S=1/2", named_grid(3))
tn1 = ITensorNetwork(s; link_space=2)
Expand All @@ -72,7 +73,7 @@ Z̃ = contract(Z, (1, 1) => (2, 1));

#' ## Generating this README

#' This file was generated with [weave.jl](https://github.com/JunoLab/Weave.jl) with the following commands:
#' This file was generated with [Weave.jl](https://github.com/JunoLab/Weave.jl) with the following commands:
#+ eval=false

using ITensorNetworks: ITensorNetworks
Expand Down
21 changes: 0 additions & 21 deletions src/Graphs/abstractdatagraph.jl
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71 changes: 0 additions & 71 deletions src/Graphs/abstractgraph.jl
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30 changes: 13 additions & 17 deletions src/ITensorNetworks.jl
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Original file line number Diff line number Diff line change
@@ -1,11 +1,9 @@
module ITensorNetworks
include("usings.jl")
include("Graphs/abstractgraph.jl")
include("Graphs/abstractdatagraph.jl")
include("lib/BaseExtensions/src/BaseExtensions.jl")
include("lib/ITensorsExtensions/src/ITensorsExtensions.jl")
include("observers.jl")
include("visualize.jl")
include("graphs.jl")
include("itensors.jl")
include("abstractindsnetwork.jl")
include("indextags.jl")
include("indsnetwork.jl")
Expand All @@ -15,16 +13,15 @@ include("abstractitensornetwork.jl")
include("contraction_sequences.jl")
include("tebd.jl")
include("itensornetwork.jl")
include("mincut.jl")
include("contract_deltas.jl")
include("approx_itensornetwork/utils.jl")
include("approx_itensornetwork/density_matrix.jl")
include("approx_itensornetwork/ttn_svd.jl")
include("approx_itensornetwork/approx_itensornetwork.jl")
include("approx_itensornetwork/partition.jl")
include("approx_itensornetwork/binary_tree_partition.jl")
include("contract_approx/mincut.jl")
include("contract_approx/contract_deltas.jl")
include("contract_approx/utils.jl")
include("contract_approx/density_matrix.jl")
include("contract_approx/ttn_svd.jl")
include("contract_approx/contract_approx.jl")
include("contract_approx/partition.jl")
include("contract_approx/binary_tree_partition.jl")
include("contract.jl")
include("utility.jl")
include("specialitensornetworks.jl")
include("boundarymps.jl")
include("partitioneditensornetwork.jl")
Expand All @@ -36,14 +33,13 @@ include("caches/beliefpropagationcache.jl")
include("contraction_tree_to_graph.jl")
include("gauging.jl")
include("utils.jl")
include("ITensorsExtensions/ITensorsExtensions.jl")
include("solvers/local_solvers/eigsolve.jl")
include("solvers/local_solvers/exponentiate.jl")
include("solvers/local_solvers/dmrg_x.jl")
include("solvers/local_solvers/contract.jl")
include("solvers/local_solvers/linsolve.jl")
include("treetensornetworks/abstracttreetensornetwork.jl")
include("treetensornetworks/ttn.jl")
include("treetensornetworks/treetensornetwork.jl")
include("treetensornetworks/opsum_to_ttn.jl")
include("treetensornetworks/projttns/abstractprojttn.jl")
include("treetensornetworks/projttns/projttn.jl")
Expand All @@ -66,8 +62,8 @@ include("inner.jl")
include("expect.jl")
include("environment.jl")
include("exports.jl")
include("ModelHamiltonians/ModelHamiltonians.jl")
include("ModelNetworks/ModelNetworks.jl")
include("lib/ModelHamiltonians/src/ModelHamiltonians.jl")
include("lib/ModelNetworks/src/ModelNetworks.jl")

using PackageExtensionCompat: @require_extensions
using Requires: @require
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2 comments on commit 0005598

@mtfishman
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Registration pull request created: JuliaRegistries/General/105537

Tip: Release Notes

Did you know you can add release notes too? Just add markdown formatted text underneath the comment after the text
"Release notes:" and it will be added to the registry PR, and if TagBot is installed it will also be added to the
release that TagBot creates. i.e.

@JuliaRegistrator register

Release notes:

## Breaking changes

- blah

To add them here just re-invoke and the PR will be updated.

Tagging

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if the Julia TagBot GitHub Action is installed, or can be done manually through the github interface, or via:

git tag -a v0.9.0 -m "<description of version>" 00055981545ae383fcd84126f48bef3fe418ea23
git push origin v0.9.0

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