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Merge pull request #189 from pwalczysko/add-filezilla
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Migrate from Aspera to FileZilla
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pwalczysko authored Dec 1, 2023
2 parents 9c8fb39 + fccaf31 commit 1e5c3ce
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27 changes: 27 additions & 0 deletions _includes/filezilla.md
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## General instructions

The raw data of all studies published in IDR can be downloaded using using anonymous File Transfer Protocol (FTP). We recommend using the [FileZilla client](https://filezilla-project.org/download.php).

You can download both whole studies as well as parts/single images.

The ftp host is available using the following details:

- host: `ftp.ebi.ac.uk`

## Desktop client step-by-step

Download and install the [FileZilla client](https://filezilla-project.org/download.php).

Start the FileZilla application. In the “Host” dialog (top-left corner) paste `ftp.ebi.ac.uk/pub/databases/IDR/` and click the `Quickconnect` button.

Click OK in the next window.

<img src="img/filezilla/filezilla-dialog.png" alt="FileZilla Warning dialog" width="50%" />

The left-hand pane is showing your local machine folders. Select the folder into which you want to download the data.

<img src="img/filezilla/filezilla-desktop.png" alt="FileZilla Desktop" width="100%" />

In the right-hand pane, browse the IDR studies to be downloaded. Check the sizes of the folders using the README files. Click onto a folder and expand it. Right-click on the desired folder or file and click `Download` in the context menu.

<img src="img/filezilla/filezilla-download.png" alt="FileZilla Desktop" width="50%" />
4 changes: 2 additions & 2 deletions download.html
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Expand Up @@ -15,7 +15,7 @@ <h1 class="hero-main-header">Data download</h1>
<p class="hero-subheader small-10 medium-10 large-10 small-offset-1 medium-offset-1 large-offset-1">
The raw imaging data for all studies published in the
Image Data Resource (IDR) is available for download using
the Aspera protocol.
the FTP protocol.
</p>
</div>
</div>
Expand All @@ -29,7 +29,7 @@ <h1 class="hero-main-header">Data download</h1>
<div class="row horizontal">
<div>

{% capture my-include %}{% include aspera.md %}{% endcapture %}
{% capture my-include %}{% include filezilla.md %}{% endcapture %}
{{ my-include | markdownify }}

</div>
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