Adding converted markdowns.

docs/contrib.md

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 <!-- Do NOT edit this file. It is automatically generated from the contrib.md.in, reagent_data_dict.csv and reagent_glossary.csv files. -->
 
 &#x26A0; **NOTE**  
-By contributing to the knowledge-base you are agreeing that the provided data be made available under a [Creative Commons Attribution 4.0 International license](https://creativecommons.org/licenses/by/4.0/) and that you will abide by the [Contributor Covenant Code of Conduct](code_of_conduct.md).
+By contributing to the knowledge-base you are agreeing that the provided data be made available under a [Creative Commons Attribution 4.0 International license](https://creativecommons.org/licenses/by/4.0/) and that you will abide by the [code of conduct](code_of_conduct.md) [![Contributor Covenant](https://img.shields.io/badge/Contributor%20Covenant-2.1-4baaaa.svg)](code_of_conduct.html).
 
 <span style="color:purple;">The knowledge-base was made possible by researchers like you, see [who they are](the_who.md) and our thoughts on overcoming the fear of sharing.</span>
 

docs/index.md

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 <img src="https://github.com/IBEXImagingCommunity/ibex_imaging_large_files/raw/main/docs/IBEX_Banner.jpg">
 
-[![Contributor Covenant](https://img.shields.io/badge/Contributor%20Covenant-2.1-4baaaa.svg)](code_of_conduct.html)
-
 <!-- Do NOT edit this file. It is automatically generated from the index.md.in and reagent_resources.csv files. -->
 
 <table style="margin-left: auto;margin-right: auto; border: 2px solid purple; border-radius: 20px;">
@@ -29,7 +27,9 @@ layout: default
 
 The Iterative Bleaching Extends Multiplexity (IBEX) imaging method is an iterative immunolabeling and chemical bleaching method that enables highly multiplexed imaging of diverse tissues. Development of the [IBEX method](https://doi.org/10.1038/s41596-021-00644-9) and [related software](https://github.com/niaid/imaris_extensions) was led by Dr. Andrea Radtke and Dr. Ziv Yaniv. [IBEX](https://doi.org/10.1073/pnas.2018488117) and related methods, [Ce3D](https://doi.org/10.1073/pnas.1708981114), [Ce3D-IBEX](https://doi.org/10.1111/imr.13052), [Opal-plex](https://doi.org/10.1073/pnas.2018488117), were originally developed in the laboratory of [Dr. Ronald N. Germain](https://www.niaid.nih.gov/research/ronald-n-germain-md-phd), US National Institutes of Health.
 
+## Code of conduct
 
+All members of the IBEX Imaging Community are expected to abide by the [code of conduct](code_of_conduct.md) [![Contributor Covenant](https://img.shields.io/badge/Contributor%20Covenant-2.1-4baaaa.svg)](code_of_conduct.html).
 
 ## Overview
 The IBEX Imaging Community is an international group of scientists committed to sharing knowledge related to multiplexed imaging in a transparent and collaborative manner. This open, global repository is a central resource for reagents, protocols, panels, publications, software, and datasets. In addition to IBEX, we support standard, single cycle multiplexed imaging (Multiplexed 2D imaging), volume imaging of cleared tissues with clearing enhanced 3D (Ce3D), highly multiplexed 3D imaging (Ce3D-IBEX), and extension of the IBEX dye inactivation protocol to the Leica Cell DIVE (Cell DIVE-IBEX).