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xPore v1.0

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@ploy-np ploy-np released this 08 Mar 10:00
· 92 commits to master since this release

Summary

  • xpore-dataprep now returns a single data file (data.json) along with 2 small index files, a read count information file, and a log file.
  • For 1 million reads, running xpore-dataprep with 1 CPU takes approximately 5 hours with 5 GB of RAM, and the uncompressed data.json file is 4GB (compared to ~150GB for fast5 files or ~200GB for Nanopolish output files). The json file is a text file and can be efficiently compressed to ~1GB.

What's Changed

Full Changelog: v0.5.6...v1.0