xPore v1.0
Summary
- xpore-dataprep now returns a single data file (data.json) along with 2 small index files, a read count information file, and a log file.
- For 1 million reads, running xpore-dataprep with 1 CPU takes approximately 5 hours with 5 GB of RAM, and the uncompressed data.json file is 4GB (compared to ~150GB for fast5 files or ~200GB for Nanopolish output files). The json file is a text file and can be efficiently compressed to ~1GB.
What's Changed
- gtf option, fastdataprep, and dataprep intermediate file removal by @yuukiiwa in #48
- Update README.md by @jonathangoeke in #49
Full Changelog: v0.5.6...v1.0