Contidtionally output the json files

doc/generate_decl_schema.wb

@@ -0,0 +1,4 @@
+{
+  "version": "0.6",
+  "features": []
+}

doc/sphinx/GWB_parameter_listings/world_builder_file/index.md

@@ -16,13 +16,13 @@ Explain how to use this page. Here is an example how to link to a specific item
 ::::{tab-item} All open
 :name: all_open
 
-:::{include} ../../../../tests/gwb-dat/world_builder_declarations_open.md
+:::{include} ../../../world_builder_declarations_open.md
 ::::
 
 ::::{tab-item} Only root open
 :name: root_open
 
-:::{include} ../../../../tests/gwb-dat/world_builder_declarations_closed.md
+:::{include} ../../../world_builder_declarations_closed.md
 ::::
 
 :::::

tests/gwb-dat/world_builder_declarations.schema.json → doc/world_builder_declarations.schema.json

@@ -6248,7 +6248,7 @@
                                                                 "documentation": "The reference density of the subducting plate in $kg/m^3$"
                                                             },
                                                             "plate velocity": {
-                                                                "default value": NaN,
+                                                                "default value": "NaN",
                                                                 "type": "number",
                                                                 "documentation": "The velocity in meters per year with which the plate subducts in meters per year."
                                                             },
@@ -6939,7 +6939,7 @@
                                                     "documentation": "The reference density of the subducting plate in $kg/m^3$"
                                                 },
                                                 "plate velocity": {
-                                                    "default value": NaN,
+                                                    "default value": "NaN",
                                                     "type": "number",
                                                     "documentation": "The velocity in meters per year with which the plate subducts in meters per year."
                                                 },
@@ -7700,7 +7700,7 @@
                                                                             "documentation": "The reference density of the subducting plate in $kg/m^3$"
                                                                         },
                                                                         "plate velocity": {
-                                                                            "default value": NaN,
+                                                                            "default value": "NaN",
                                                                             "type": "number",
                                                                             "documentation": "The velocity in meters per year with which the plate subducts in meters per year."
                                                                         },
@@ -8391,7 +8391,7 @@
                                                                 "documentation": "The reference density of the subducting plate in $kg/m^3$"
                                                             },
                                                             "plate velocity": {
-                                                                "default value": NaN,
+                                                                "default value": "NaN",
                                                                 "type": "number",
                                                                 "documentation": "The velocity in meters per year with which the plate subducts in meters per year."
                                                             },

include/world_builder/world.h

@@ -60,7 +60,7 @@ namespace WorldBuilder
        * documented algorithm), we can test the results and they should be the same even for different
        * compilers and machines.
        */
-      World(std::string filename, bool has_output_dir = false, const std::string &output_dir = "", unsigned long random_number_seed = 1, const bool limit_debug_consistency_checks = false);
+      World(std::string filename, bool has_output_dir = false, const std::string &output_dir = "", unsigned long random_number_seed = 1, const bool limit_debug_consistency_checks = true);
 
       /**
        * Destructor

source/gwb-dat/main.cc

@@ -73,7 +73,8 @@ int main(int argc, char **argv)
   unsigned int grain_compositions = 0;
   size_t n_grains = 0;
   bool convert_spherical = false;
-  bool limit_debug_consistency_checks = true;
+  bool limit_debug_consistency_checks = false;
+  bool output_json_files = false;
 
   if (find_command_line_option(argv, argv+argc, "-h") || find_command_line_option(argv, argv+argc, "--help"))
     {
@@ -85,7 +86,10 @@ int main(int argc, char **argv)
     }
 
   if (find_command_line_option(argv, argv+argc, "-ldcc") || find_command_line_option(argv, argv+argc, "--limit-debug-consistency-checks"))
-    limit_debug_consistency_checks = false;
+    limit_debug_consistency_checks = true;
+
+  if (find_command_line_option(argv, argv+argc, "--output-json-files"))
+    output_json_files = true;
 
   if (argc == 1)
     {
@@ -102,11 +106,12 @@ int main(int argc, char **argv)
       return 0;
     }
 
-  if ((argc == 3 && !limit_debug_consistency_checks) || argc > 4)
+  if ((argc == 3 && !(limit_debug_consistency_checks && output_json_files)) || (argc == 4 && !(!limit_debug_consistency_checks != !output_json_files)) || (argc == 5 && (!limit_debug_consistency_checks && !output_json_files)) || argc > 5)
     {
       std::cout << "Only exactly two command line arguments may be given, which should be the world builder file location and the data file location (in that order) "
-                << "or exactly three command line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks (in that order). "
-                << ", argc = " << argc << ", limit_debug_consistency_checks = " << (limit_debug_consistency_checks ? "true" : "false") << std::endl;
+                << "or exactly three command line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks or --output-json-files (in that order),"
+                "or exactly four comman line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks and --output-json-files (in that order),"
+                << ", argc = " << argc << ", limit_debug_consistency_checks = " << (limit_debug_consistency_checks ? "true" : "false") << ", output_json_files = " << (output_json_files ? "true" : "false") << std::endl;
       return 0;
     }
 
@@ -130,7 +135,7 @@ int main(int argc, char **argv)
       //try
       {
         const std::string output_dir = wb_file.substr(0,wb_file.find_last_of("/\\") + 1);
-        world = std::make_unique<WorldBuilder::World>(wb_file, true, output_dir,1,limit_debug_consistency_checks);
+        world = std::make_unique<WorldBuilder::World>(wb_file, output_json_files, output_dir,1,limit_debug_consistency_checks);
       }
       /*catch (std::exception &e)
         {

source/world_builder/world.cc

@@ -306,7 +306,7 @@ namespace WorldBuilder
     // We receive the cartesian points from the user.
     const Point<3> point(point_,cartesian);
     (void) this->limit_debug_consistency_checks;
-    WBAssert(!this->limit_debug_consistency_checks || this->parameters.coordinate_system->natural_coordinate_system() == cartesian
+    WBAssert(this->limit_debug_consistency_checks || this->parameters.coordinate_system->natural_coordinate_system() == cartesian
              || approx(depth, this->parameters.coordinate_system->max_model_depth()-sqrt(point_[0]*point_[0]+point_[1]*point_[1]+point_[2]*point_[2])),
              "Inconsistent input. Please check whether the radius in the sperhical coordinates is consistent with the radius of the planet as defined "
              << "in the program that uses the Geodynamic World Builder. "

tests/CMakeLists.txt

@@ -143,6 +143,20 @@ IF(WB_RUN_APP_TESTS)
     -D TEST_DIFF=${TEST_DIFF}
     -P ${CMAKE_SOURCE_DIR}/tests/gwb-dat/run_gwb-dat_tests.cmake
       WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/gwb-dat/)
+
+  # Add tests which generates the declarations and schema files in the docs folder. Do not care about the output.
+    set(TEST_ARGUMENTS "${CMAKE_SOURCE_DIR}/doc/generate_decl_schema.wb\;${CMAKE_SOURCE_DIR}/tests/gwb-dat/app_wb2.dat\;--output-json-files")
+  add_test(generate_declarations_and_schema
+  ${CMAKE_COMMAND} 
+    -D TEST_NAME=generate_declarations_and_schema 
+    -D TEST_PROGRAM=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/gwb-dat${CMAKE_EXECUTABLE_SUFFIX} 
+    -D TEST_ARGS=${TEST_ARGUMENTS}
+    -D TEST_OUTPUT=${CMAKE_BINARY_DIR}/tests/gwb-dat/generate_declarations_and_schema/screen-output.log 
+    -D TEST_REFERENCE=${CMAKE_CURRENT_SOURCE_DIR}/gwb-dat/generate_declarations_and_schema/screen-output.log 
+    -D TEST_DIFF=${TEST_DIFF}
+    -P ${CMAKE_SOURCE_DIR}/tests/gwb-dat/run_gwb-dat_tests.cmake
+      WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/gwb-dat/)
+
 
   #find all the integration test files
   file(GLOB_RECURSE APP_TEST_SOURCES "gwb-dat/*.wb")

tests/gwb-dat/generate_declarations_and_schema/screen-output.log

@@ -0,0 +1,4 @@
+# x y z d g T c0 c1 c2 c3 c4 
+100e3 200e3 0 0 1600 0 0 0 0 0 
+120e3 550e3 0 0 1600 0 0 0 0 0 
+1500e3 1500e3 3 0 1600 0 0 0 0 0 

tests/gwb-dat/testing_too_many_arguments/screen-output.log

@@ -1 +1 @@
-Only exactly two command line arguments may be given, which should be the world builder file location and the data file location (in that order) or exactly three command line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks (in that order). , argc = 5, limit_debug_consistency_checks = true
+Only exactly two command line arguments may be given, which should be the world builder file location and the data file location (in that order) or exactly three command line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks or --output-json-files (in that order),or exactly four comman line arguments, which should be the world builder file location, the data file location and --limit-debug-consistency-checks and --output-json-files (in that order),, argc = 5, limit_debug_consistency_checks = false, output_json_files = false