Merge pull request #190 from MFraters/release_v0.3.0

Release v0.3.0
GeodynamicWorldBuilder · Jun 18, 2020 · 924b1ce · 924b1ce
2 parents 85fad2d + 68574e8
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diff --git a/CITATION b/CITATION
@@ -10,13 +10,13 @@ URL = {https://se.copernicus.org/articles/10/1785/2019/},
 DOI = {10.5194/se-10-1785-2019}
 }
 
-@misc{gwb-doi-v0.2.0,
-  title        = {{The Geodynamic World Builder} v2.1.0 [software]},
+@misc{gwb-doi-v0.3.0,
+  title        = {{The Geodynamic World Builder} v0.3.0 [software]},
   author       = {Menno Fraters and
                   others},
-  month        = oct,
-  year         = 2019,
-  DOI          = {10.5281/zenodo.3517132]},
-  URL          = {https://doi.org/10.5281/zenodo.3517132]},
+  month        = jun,
+  year         = 2020,
+  DOI          = {10.5281/zenodo.3900603]},
+  URL          = {https://doi.org/10.5281/zenodo.3900603]},
 }
 
diff --git a/README.md b/README.md
@@ -20,9 +20,9 @@ Please do not keep it to yourself and let us know. Others will also profit from
 ## How to cite?
 The developers of the Geodynamic World Builder request that you cite the following publication:
 
-Fraters, M., Thieulot, C., van den Berg, A., and Spakman, W.: The Geodynamic World Builder: a solution for complex initial conditions in numerical modelling, Solid Earth Discuss., [https://doi.org/10.5194/se-2019-24](https://doi.org/10.5194/se-2019-24), 2019.
+Fraters, M., Thieulot, C., van den Berg, A., and Spakman, W.: The Geodynamic World Builder: a solution for complex initial conditions in numerical modelling, Solid Earth, [https://doi.org/10.5194/se-10-1785-2019](https://doi.org/10.5194/se-10-1785-2019), 2019.
 
-And cite the specific version of the software used. Version 0.2.0 can be cited as:
+And cite the specific version of the software used. Version 0.3.0 can be cited as:
 
-Menno Fraters and others. 2019, October 23. The Geodynamic World Builder v0.2.0. Zenodo. [https://doi.org/10.5281/zenodo.3517132](https://doi.org/10.5281/zenodo.3517132).
+Menno Fraters and others. 2019, October 23. The Geodynamic World Builder v0.3.0. Zenodo. [https://doi.org/10.5281/zenodo.3900603](https://doi.org/10.5281/zenodo.3900603).
 
diff --git a/VERSION b/VERSION
@@ -1 +1 @@
-0.3.0-pre
+0.3.0
diff --git a/app/main.cc b/app/main.cc
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/doc/changelog/changelog_header.template b/doc/changelog/changelog_header.template
@@ -0,0 +1,7 @@
+/**
+ * @page changes_between_OLDVERSION_and_NEWVERSION Changes between version OLDVERSION and version NEWVERSION
+ *
+ * <p> This is the list of changes made after the release of ASPECT version
+ * OLDVERSION for version NEWVERSION. aaa
+ * a</p>a
+ */
diff --git a/doc/changelog/to-0.3.0.h b/doc/changelog/to-0.3.0.h
@@ -0,0 +1,25 @@
+/**
+ * @page changes_between_0.2.0_and_0.3.0 Changes between version 0.2.0 and version 0.3.0
+ * 
+ * This is the list of changes made after the release of ASPECT version
+ * 0.2.0 and before 0.3.0.
+ * 
+ * 
+ * <ol>
+ * <li> Change: Fortran compiler is now optional
+ *
+ * <li> Change: The world builder no longer requires or uses OpenMP. It was not used in the core 
+ * library, but used to speed up the Visualization program. That uses its own threads now. 
+ * 
+ * <li> New: A Python interface has been added. It is now possible to use the World Builder from a
+ * Python program. Integration with numpy has not yet been added.
+ * 
+ * <li> New: An experimental grains interface containing grain sizes and orientations has been added.
+ * 
+ * <li> Change: The usage of cmake has been moderized allowing for more flexibility
+ * 
+ * <li> Fixed: The code has been refactored and cleaned exstinively and new compiler warnings have been 
+ * enabled and fixed.
+ * </ol>
+ * 
+ */
diff --git a/doc/doxygen_config.dox b/doc/doxygen_config.dox
@@ -5,7 +5,7 @@
 #---------------------------------------------------------------------------
 DOXYFILE_ENCODING      = UTF-8
 PROJECT_NAME           = "World Builder"
-PROJECT_NUMBER         = 0.3.0-pre
+PROJECT_NUMBER         = 0.3.0
 PROJECT_BRIEF          = "A geodynamic initial conditions generator"
 PROJECT_LOGO           = 
 OUTPUT_DIRECTORY       = doc/doxygen/
@@ -112,7 +112,7 @@ WARN_LOGFILE           =
 #---------------------------------------------------------------------------
 # Configuration options related to the input files
 #---------------------------------------------------------------------------
-INPUT                  =  README.md source include
+INPUT                  =  README.md source include doc/changelog
 INPUT_ENCODING         = UTF-8
 FILE_PATTERNS          = *.c \
                          *.cc \

diff --git a/doc/manual/manual.tex b/doc/manual/manual.tex
@@ -165,9 +165,9 @@ \section{Citing the world builder}
 
 \noindent Fraters, M., Thieulot, C., van den Berg, A., and Spakman, W.: The Geodynamic World Builder: a solution for complex initial conditions in numerical modelling, Solid Earth., 10, 1785–1807, \url{https://doi.org/10.5194/se-10-1785-2019}, 2019.\\
 
-\noindent And cite the specific version of the software used. Version 0.2.0 can be cited as:\\
+\noindent And cite the specific version of the software used. Version 0.3.0 can be cited as:\\
 
-\noindent Menno Fraters and others. 2019, October 23. The Geodynamic World Builder v0.2.0. Zenodo. \url{https://doi.org/10.5281/zenodo.3517132}.
+\noindent Menno Fraters and others. 2019, October 23. The Geodynamic World Builder v0.3.0. Zenodo. \url{https://doi.org/10.5281/zenodo.3900603}.
 
 
 \section{Acknowledgments}

diff --git a/include/world_builder/coordinate_systems/cartesian.h b/include/world_builder/coordinate_systems/cartesian.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/coordinate_systems/interface.h b/include/world_builder/coordinate_systems/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/coordinate_systems/spherical.h b/include/world_builder/coordinate_systems/spherical.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate.h b/include/world_builder/features/continental_plate.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/composition/interface.h b/include/world_builder/features/continental_plate_models/composition/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/composition/uniform.h b/include/world_builder/features/continental_plate_models/composition/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/grains/interface.h b/include/world_builder/features/continental_plate_models/grains/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/grains/random_uniform_distribution.h b/include/world_builder/features/continental_plate_models/grains/random_uniform_distribution.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/grains/uniform.h b/include/world_builder/features/continental_plate_models/grains/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/temperature/adiabatic.h b/include/world_builder/features/continental_plate_models/temperature/adiabatic.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/temperature/interface.h b/include/world_builder/features/continental_plate_models/temperature/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/temperature/linear.h b/include/world_builder/features/continental_plate_models/temperature/linear.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/continental_plate_models/temperature/uniform.h b/include/world_builder/features/continental_plate_models/temperature/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault.h b/include/world_builder/features/fault.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/composition/interface.h b/include/world_builder/features/fault_models/composition/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/composition/uniform.h b/include/world_builder/features/fault_models/composition/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/grains/interface.h b/include/world_builder/features/fault_models/grains/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/grains/random_uniform_distribution.h b/include/world_builder/features/fault_models/grains/random_uniform_distribution.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/grains/uniform.h b/include/world_builder/features/fault_models/grains/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/temperature/adiabatic.h b/include/world_builder/features/fault_models/temperature/adiabatic.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/temperature/interface.h b/include/world_builder/features/fault_models/temperature/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/temperature/linear.h b/include/world_builder/features/fault_models/temperature/linear.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/fault_models/temperature/uniform.h b/include/world_builder/features/fault_models/temperature/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/interface.h b/include/world_builder/features/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer.h b/include/world_builder/features/mantle_layer.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/composition/interface.h b/include/world_builder/features/mantle_layer_models/composition/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/composition/uniform.h b/include/world_builder/features/mantle_layer_models/composition/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/grains/interface.h b/include/world_builder/features/mantle_layer_models/grains/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/grains/random_uniform_distribution.h b/include/world_builder/features/mantle_layer_models/grains/random_uniform_distribution.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/grains/uniform.h b/include/world_builder/features/mantle_layer_models/grains/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/temperature/adiabatic.h b/include/world_builder/features/mantle_layer_models/temperature/adiabatic.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/temperature/interface.h b/include/world_builder/features/mantle_layer_models/temperature/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/temperature/linear.h b/include/world_builder/features/mantle_layer_models/temperature/linear.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/mantle_layer_models/temperature/uniform.h b/include/world_builder/features/mantle_layer_models/temperature/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate.h b/include/world_builder/features/oceanic_plate.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/composition/interface.h b/include/world_builder/features/oceanic_plate_models/composition/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/composition/uniform.h b/include/world_builder/features/oceanic_plate_models/composition/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/grains/interface.h b/include/world_builder/features/oceanic_plate_models/grains/interface.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/grains/random_uniform_distribution.h b/include/world_builder/features/oceanic_plate_models/grains/random_uniform_distribution.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/grains/uniform.h b/include/world_builder/features/oceanic_plate_models/grains/uniform.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.
 

diff --git a/include/world_builder/features/oceanic_plate_models/temperature/adiabatic.h b/include/world_builder/features/oceanic_plate_models/temperature/adiabatic.h
@@ -1,5 +1,5 @@
 /*
-  Copyright (C) 2018 by the authors of the World Builder code.
+  Copyright (C) 2018 - 2020 by the authors of the World Builder code.
 
   This file is part of the World Builder.