Fix JOSS paper references #1583
Workflow file for this run
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| name: benchmarks | |
| on: [pull_request] | |
| concurrency: | |
| group: ${{ github.actor }}-${{ github.ref }}-benchmarks | |
| cancel-in-progress: true | |
| jobs: | |
| benchmarks: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| benchmark_number: [1,2,3,4,5,6,7,8] | |
| include: | |
| - benchmark_number: 1 | |
| benchmark_name: 'slab_interpolation_simple_none' | |
| benchmark_gridfile: 'cartesian_subducting_plate_gridfile' | |
| - benchmark_number: 2 | |
| benchmark_name: 'slab_interpolation_simple_curved_none' | |
| benchmark_gridfile: 'cartesian_subducting_plate_gridfile' | |
| - benchmark_number: 3 | |
| benchmark_name: 'spherical_slab_interpolation_simple_none' | |
| benchmark_gridfile: 'spherical_subducting_plate_gridfile' | |
| - benchmark_number: 4 | |
| benchmark_name: 'slab_interpolation_simple_curved_CMS' | |
| benchmark_gridfile: 'cartesian_subducting_plate_gridfile' | |
| - benchmark_number: 5 | |
| benchmark_name: 'spherical_slab_interpolation_simple_CMS' | |
| benchmark_gridfile: 'spherical_subducting_plate_gridfile' | |
| - benchmark_number: 6 | |
| benchmark_name: 'spherical_fault_interpolation_simple_none' | |
| benchmark_gridfile: 'spherical_subducting_plate_gridfile' | |
| - benchmark_number: 7 | |
| benchmark_name: 'continental_min_max_surface' | |
| benchmark_gridfile: 'cartesian_surface' | |
| - benchmark_number: 8 | |
| benchmark_name: 'continental_min_max_surface_spherical' | |
| benchmark_gridfile: 'spherical_surface_p180' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Setup cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: '3.16.x' | |
| - uses: actions-rs/toolchain@v1 | |
| with: | |
| profile: minimal | |
| toolchain: stable | |
| - name: cmake version | |
| run: cmake --version | |
| - name: Checkout cbdr | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: MFraters/cbdr | |
| ref: github_actions_fix | |
| path: cbdr | |
| - name: retrieve cache cbdr | |
| uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ~/.cargo/bin/ | |
| ~/.cargo/registry/index/ | |
| ~/.cargo/registry/cache/ | |
| ~/.cargo/git/db/ | |
| ~/.cargo/git/ | |
| target/ | |
| ./target/ | |
| ${{github.workspace}}/cbdr/ | |
| ${{github.workspace}}/cbdr/target/ | |
| key: ${{ runner.os }}-cargo-${{ hashFiles('**/Cargo.lock') }} | |
| - name: retrieve cache main | |
| uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ${{github.workspace}}/main/ | |
| key: ${{ runner.os }}-gwb-main-v3}} | |
| - name: retrieve cache feature | |
| uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ${{github.workspace}}/feature/ | |
| key: ${{ runner.os }}-gwb-feature-${{ github.event.number }}-v3}} | |
| - name: Checkout cbdr | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: MFraters/cbdr | |
| ref: github_actions_fix | |
| path: cbdr | |
| clean: false | |
| - name: Checkout feature | |
| uses: actions/checkout@v2 | |
| with: | |
| path: feature/source | |
| clean: false | |
| - name: Checkout main | |
| uses: actions/checkout@v2 | |
| with: | |
| ref: main | |
| path: main/source | |
| clean: false | |
| - name: cd Build Environment | |
| run: | | |
| cd ${{github.workspace}}/cbdr/; | |
| cargo build --release; | |
| - name: Create Build Environment | |
| run: | | |
| sudo apt install ninja-build; | |
| cmake -E make_directory ${{github.workspace}}/main/build; | |
| - name: Configure CMake | |
| shell: bash | |
| working-directory: ${{github.workspace}}/main/build | |
| run: | | |
| pwd; | |
| ls; | |
| cmake -G"Ninja" $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=Release -DCMAKE_CXX_FLAGS=-Werror -DWB_INCLUDE_UNIT_TEST=OFF ${{github.workspace}}/main/source/; | |
| - name: Build gwb | |
| working-directory: ${{github.workspace}}/main/build | |
| shell: bash | |
| run: ninja | |
| - name: Create Build Environment | |
| run: cmake -E make_directory ${{github.workspace}}/feature/build | |
| - name: cd Build Environment | |
| run: cd ${{github.workspace}}/feature/build; | |
| - name: Configure CMake | |
| shell: bash | |
| working-directory: ${{github.workspace}}/feature/build | |
| run: | | |
| pwd; | |
| ls; | |
| cmake -G"Ninja" $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=Release -DCMAKE_CXX_FLAGS=-Werror -DWB_INCLUDE_UNIT_TEST=OFF ${{github.workspace}}/feature/source/; | |
| - name: Build gwb | |
| working-directory: ${{github.workspace}}/feature/build | |
| shell: bash | |
| run: ninja | |
| - name: make results dir | |
| shell: bash | |
| run: | | |
| rm -rf ${{github.workspace}}/benchmark_${{matrix.benchmark_number}}_results/; | |
| mkdir -p ${{github.workspace}}/benchmark_${{matrix.benchmark_number}}_results/ | |
| - name: store pull request number | |
| shell: bash | |
| if: matrix.benchmark_number == 1 | |
| run: | | |
| echo "${{matrix.benchmark_number}}"; | |
| echo "${{ github.event.number }}" > ${{github.workspace}}/benchmark_${{matrix.benchmark_number}}_results/NR | |
| - name: run benchmark | |
| shell: bash | |
| run: | | |
| cd ${{github.workspace}}/cbdr/; | |
| time cargo run --release sample --timeout=900s "main:${{github.workspace}}/main/build/bin/./gwb-grid ${{github.workspace}}/feature/source/tests/gwb-dat/${{matrix.benchmark_name}}.wb ${{github.workspace}}/feature/source/tests/gwb-grid/${{matrix.benchmark_gridfile}}.grid" "feature:${{github.workspace}}/feature/build/bin/./gwb-grid ${{github.workspace}}/feature/source/tests/gwb-dat/${{matrix.benchmark_name}}.wb ${{github.workspace}}/feature/source/tests/gwb-grid/${{matrix.benchmark_gridfile}}.grid" > ${{github.workspace}}/result_${{matrix.benchmark_number}}.csv; | |
| cat ${{github.workspace}}/result_${{matrix.benchmark_number}}.csv; | |
| cat ${{github.workspace}}/result_${{matrix.benchmark_number}}.csv | cargo run --release analyze --disable-dynamic-printing > ${{github.workspace}}/benchmark_${{matrix.benchmark_number}}_results/analyze_${{matrix.benchmark_number}}.log ||:; | |
| cat ${{github.workspace}}/benchmark_${{matrix.benchmark_number}}_results/analyze_${{matrix.benchmark_number}}.log | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: benchmark_${{matrix.benchmark_number}}_results | |
| path: benchmark_${{matrix.benchmark_number}}_results/ |