Add better handling for bedMethyl files #4662
Merged
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Our default bedMethyl parser would get confused by these, and think it was UCSC transcript. It is hard to really tell what data in a BED file is indicating without any header. We try to use heuristics to determine when something should be a UCSC transcript in BED format but it is tricky. In any case, this PR adds more heuristics to detect bedMethyl, parse it in a specialized way
This PR also makes it so that they can be displayed in a MultiQuantitativeTrack. This lets you split out the modifications types into different subtracts. This requires passing the currently displayed regions to the "getSources" wiggle RPC call. there were older comments that said it would do this but now it just does it :)