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Merge pull request #34 from Ferlab-Ste-Justine/feat/CLIN-3267-bump-pi…
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…peline-version

feat: CLIN-3267 Bump version to 2.1.0
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LysianeBouchard authored Oct 9, 2024
2 parents c1fc771 + 1586afd commit b27a694
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4 changes: 3 additions & 1 deletion CHANGELOG.md
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v2.1.0dev - [date]

## v2.0.0dev - [date]

## v2.0.0dev

### `Added`
- [#25](https://github.com/Ferlab-Ste-Justine/Post-processing-Pipeline/pull/25) Added exomiser module and introduced `tools` parameter to control the execution of VEP and Exomiser.
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2 changes: 1 addition & 1 deletion README.md
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Here is an example nextflow command to run the pipeline:

```bash
nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.0.0" \
nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.1.0" \
-params-file params.json \
--input samplesheet.csv \
--outdir results/dir \
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2 changes: 1 addition & 1 deletion docs/usage.md
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Expand Up @@ -54,7 +54,7 @@ These files must be correctly downloaded and specified through pipeline paramete
The typical command for running the pipeline is as follows:

```bash
nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.0.0" \
nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.1.0" \
-params-file params.json \
--input samplesheet.csv \
--outdir results/dir \
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -369,7 +369,7 @@ manifest {
description = """Variant analysis for genome and exome GVCFs"""
mainScript = 'main.nf'
nextflowVersion = '!>=23.10.1'
version = '2.0.0dev'
version = '2.1.0dev'
doi = ''
}

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