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Merge pull request #40 from FRED-2/cython
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Cython dependency
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andras86 authored Oct 12, 2016
2 parents d7ecf01 + 6c0d94c commit 174e2e3
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1 change: 1 addition & 0 deletions .travis.yml
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Expand Up @@ -36,6 +36,7 @@ before_script:
- export LD_LIBRARY_PATH=${PWD}/hdf5-1.8.17-linux-centos7-x86_64-gcc485-shared/lib:$LD_LIBRARY_PATH
- export HDF5_DIR=${PWD}/hdf5-1.8.17-linux-centos7-x86_64-gcc485-shared/
- pip install tables
- pip install cython
- pip install pandas

script: python OptiTypePipeline.py -i ./test/rna/CRC_81_N_2_fished.fastq --rna -v -o ./test/rna/ -c ./test/test_config.ini

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