release 83 tree.debug.error handling.

Ecogenomics · Apr 13, 2018 · ae4a15b · ae4a15b
1 parent 106d387
commit ae4a15b
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Showing 6 changed files with 453 additions and 391 deletions.
diff --git a/bin/gtdbtk b/bin/gtdbtk
@@ -142,6 +142,8 @@ if __name__ == '__main__':
                                     help='desired prefix for output files')
     optional_classify_wf.add_argument('--cpus', default=1, type=int,
                                     help='number of CPUs to use')
+    optional_classify_wf.add_argument('--debug', action="store_true",
+                                    help='create intermediate files for debugging purposes.')
     optional_classify_wf.add_argument('-h', '--help', action="help",
                                     help="show help message")
 
@@ -249,6 +251,8 @@ if __name__ == '__main__':
                                     help='desired prefix for output files')
     optional_classify.add_argument('--cpus', default=1, type=int,
                                     help='number of CPUs to use')
+    optional_classify.add_argument('--debug', action="store_true",
+                                    help='create intermediate files for debugging purposes.')
     optional_classify.add_argument('-h', '--help', action="help",
                                     help="show help message")
 

diff --git a/gtdbtk/VERSION b/gtdbtk/VERSION
@@ -1,3 +1,7 @@
+0.0.6
+- Migration to R83 and integration of UBA genomes
+- add "debug" flag to classify options
+- error handling improvement
 0.0.5
 - stable version for pip 
 0.0.4b3