docs(Update the install process): Modify to point downloads to ACE se…

…rver
Ecogenomics · May 17, 2024 · 877c742 · 877c742
1 parent 6753520
commit 877c742
Showing 1 changed file with 20 additions and 3 deletions.
diff --git a/docs/src/installing/index.rst b/docs/src/installing/index.rst
@@ -119,12 +119,29 @@ GTDB-Tk reference data
 
 GTDB-Tk requires ~110G of external data that needs to be downloaded and unarchived:
 
+For full package:
+
 .. code-block:: bash
 
-    wget https://data.gtdb.ecogenomic.org/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz
-    wget https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz  (or, mirror)
+    wget https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz
+    wget https://data.gtdb.ecogenomic.org/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz ( mirror for Australia)
     tar xvzf gtdbtk_data.tar.gz
 
+For split package:
+
+To create an archive from the GTDB-Tk release data parts:
+
+1. Ensure all parts of the GTDB-Tk release data are in the same directory.
+2. Open a terminal or command prompt.
+3. Navigate to the directory containing the parts of the GTDB-Tk release data.
+4. Use the following command to concatenate all parts into a single archive:
+   cat gtdbtk_r220_data.tar.gz.part_* > gtdbtk_r220_data.tar.gz
+
+5. Once the command finishes executing, you will have a single archive file named 'gtdbtk_r220_data.tar.gz' in the same directory.
+
+You can find the gtdbtk_r220_data.tar.gz.part_* files under:
+https://data.ace.uq.edu.au/public/gtdb/data/releases/release220/220.0/auxillary_files/gtdbtk_package/split_package/gtdbtk_r220_data.tar.gz.part_aa
+
 
 .. note:: Note that different versions of the GTDB release data may not run on all versions of GTDB-Tk, check the supported versions!
 
@@ -137,7 +154,7 @@ GTDB-Tk requires ~110G of external data that needs to be downloaded and unarchiv
      - Minimum version
      - Maximum version
      - MD5
-   * - `R220 <https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/gtdbtk_package/full_package/gtdbtk_r220_data.tar.gz>`_
+   * - `R220 <https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz>`_
      - 2.4.0
      - Current
      - 5aafa1b9c27ceda003d75adf238ed9e0