Variant annotation / direction of effect notebook #52
Workflow file for this run
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name: Open Targets PharmGKB pipelines | |
on: | |
pull_request: | |
branches: [ main ] | |
push: | |
branches: [ prototype ] | |
workflow_dispatch: | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Set up Python 3.8 | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.8 | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
python setup.py install | |
- name: Run tests | |
run: python -m pytest tests |