Added pypi publication workflow

.github/workflows/publish.yml

@@ -0,0 +1,51 @@
+name: Upload Python Package
+
+on:
+  release:
+    types: [published]
+
+jobs:
+  build:
+    name: Build distribution 📦
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: "3.x"
+    - name: Install pypa/build
+      run: >-
+        python3 -m
+        pip install
+        build
+        --user
+    - name: Build a binary wheel and a source tarball
+      run: python3 -m build
+    - name: Store the distribution packages
+      uses: actions/upload-artifact@v3
+      with:
+        name: python-package-distributions
+        path: path: dist/
+
+  publish-to-pypi:
+    name: >-
+      Publish Python 🐍 distribution 📦 to PyPI
+    needs:
+    - build
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/mgnify-pipelines-toolkit
+    permissions:
+      id-token: write  # IMPORTANT: mandatory for trusted publishing
+
+    steps:
+    - name: Download all the dists
+      uses: actions/download-artifact@v3
+      with:
+        name: python-package-distributions
+        path: dist/
+    - name: Publish distribution 📦 to PyPI
+      uses: pypa/gh-action-pypi-publish@release/v1

pyproject.toml

@@ -1,5 +1,6 @@
 [project]
 name = "genomeuploader"
+version = "2.0.0"
 readme = "README.md"
 authors = [
   {name = "MGnify team", email = "[email protected]"},
@@ -23,9 +24,14 @@ classifiers = [
 dependencies = [
     "requests==2.26.0",
     "pandas==1.4.1",
-    "python-dotenv==1.0.1"
+    "python-dotenv==1.0.1",
+    "ena-webin-cli"
 ]
 
+[project.urls]
+Homepage = "https://github.com/EBI-Metagenomics/genome_uploader"
+Issues = "https://github.com/EBI-Metagenomics/genome_uploader/issues"
+
 [tool.pytest.ini_options]
 minversion = "6.0"
 addopts = "-ra -q"