hal2vg 1.0.16 2021-12-20

hal2vg 1.0.16 is available in the following forms:

• Static Linux Binary: hal2vg (Don't forget to mark it executable: chmod +x hal2vg); also clip-vg, halRemoveDupes, halMergeChroms, halUnclip and filter-paf-deletions
• Source Tarball: hal2vg-v1.0.16.tar.gz
  Install instructions in README.md

WARNING: do not use the github automatically generated source files (Source code (zip) or Source code (tar.gz)), these are not correct.

Release notes

• Fix clip-vg -e to properly forwardize self-loops -- a bug previously left out edges in some cases leaving invalid paths
• Add filter-paf-deletions to remove mappings that would induce large deletions in resulting sequence graph